Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MT-ND3P03897 AC009102.3-201ENST00000623118 1491 ntBASIC18.28■□□□□ 0.52
MT-ND3P03897 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.28■□□□□ 0.52
MT-ND3P03897 AC080080.1-201ENST00000625121 2420 ntBASIC18.28■□□□□ 0.52
MT-ND3P03897 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MT-ND3P03897 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MT-ND3P03897 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.28■□□□□ 0.52
MT-ND3P03897 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.28■□□□□ 0.52
MT-ND3P03897 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MT-ND3P03897 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MT-ND3P03897 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.28■□□□□ 0.52
MT-ND3P03897 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MT-ND3P03897 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
MT-ND3P03897 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MT-ND3P03897 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
MT-ND3P03897 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MT-ND3P03897 AC106820.2-201ENST00000563775 3264 ntBASIC18.28■□□□□ 0.52
MT-ND3P03897 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MT-ND3P03897 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.28■□□□□ 0.52
MT-ND3P03897 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
MT-ND3P03897 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MT-ND3P03897 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
MT-ND3P03897 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MT-ND3P03897 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.28■□□□□ 0.52
MT-ND3P03897 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.27■□□□□ 0.52
MT-ND3P03897 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
MT-ND3P03897 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MT-ND3P03897 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
MT-ND3P03897 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
MT-ND3P03897 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.27■□□□□ 0.52
MT-ND3P03897 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
MT-ND3P03897 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MT-ND3P03897 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.27■□□□□ 0.52
MT-ND3P03897 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
MT-ND3P03897 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
MT-ND3P03897 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.27■□□□□ 0.52
MT-ND3P03897 CA15P1-201ENST00000481698 905 ntBASIC18.27■□□□□ 0.52
MT-ND3P03897 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.27■□□□□ 0.52
MT-ND3P03897 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
MT-ND3P03897 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
MT-ND3P03897 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.27■□□□□ 0.52
MT-ND3P03897 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
MT-ND3P03897 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
MT-ND3P03897 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
MT-ND3P03897 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
MT-ND3P03897 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
MT-ND3P03897 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
MT-ND3P03897 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MT-ND3P03897 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MT-ND3P03897 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.26■□□□□ 0.51
MT-ND3P03897 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
MT-ND3P03897 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
MT-ND3P03897 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MT-ND3P03897 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MT-ND3P03897 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
MT-ND3P03897 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
MT-ND3P03897 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
MT-ND3P03897 MIR149-201ENST00000384879 89 ntBASIC18.26■□□□□ 0.51
MT-ND3P03897 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MT-ND3P03897 AK4P3-201ENST00000418260 669 ntBASIC18.26■□□□□ 0.51
MT-ND3P03897 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.26■□□□□ 0.51
MT-ND3P03897 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
MT-ND3P03897 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
MT-ND3P03897 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MT-ND3P03897 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.26■□□□□ 0.51
MT-ND3P03897 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MT-ND3P03897 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.26■□□□□ 0.51
MT-ND3P03897 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MT-ND3P03897 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MT-ND3P03897 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.26■□□□□ 0.51
MT-ND3P03897 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MT-ND3P03897 AC099398.1-201ENST00000567919 2776 ntBASIC18.26■□□□□ 0.51
MT-ND3P03897 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
MT-ND3P03897 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MT-ND3P03897 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
MT-ND3P03897 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MT-ND3P03897 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MT-ND3P03897 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.25■□□□□ 0.51
MT-ND3P03897 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.25■□□□□ 0.51
MT-ND3P03897 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MT-ND3P03897 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
MT-ND3P03897 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
MT-ND3P03897 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
MT-ND3P03897 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MT-ND3P03897 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MT-ND3P03897 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
MT-ND3P03897 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
MT-ND3P03897 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.25■□□□□ 0.51
MT-ND3P03897 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
MT-ND3P03897 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MT-ND3P03897 AC093010.1-201ENST00000473625 1624 ntBASIC18.25■□□□□ 0.51
MT-ND3P03897 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
MT-ND3P03897 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MT-ND3P03897 AC087388.1-201ENST00000571370 1112 ntBASIC18.25■□□□□ 0.51
MT-ND3P03897 NTF6B-201ENST00000591913 560 ntBASIC18.25■□□□□ 0.51
MT-ND3P03897 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
MT-ND3P03897 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.25■□□□□ 0.51
MT-ND3P03897 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.25■□□□□ 0.51
MT-ND3P03897 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.25■□□□□ 0.51
MT-ND3P03897 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms