Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOC3P02656 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOC3P02656 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.42□□□□□ -0.1
APOC3P02656 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOC3P02656 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOC3P02656 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.41□□□□□ -0.1
APOC3P02656 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOC3P02656 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.41□□□□□ -0.1
APOC3P02656 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.41□□□□□ -0.1
APOC3P02656 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.41□□□□□ -0.1
APOC3P02656 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOC3P02656 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOC3P02656 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.41□□□□□ -0.1
APOC3P02656 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
APOC3P02656 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
APOC3P02656 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOC3P02656 AC104581.4-201ENST00000623126 3052 ntBASIC14.41□□□□□ -0.1
APOC3P02656 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOC3P02656 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOC3P02656 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOC3P02656 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOC3P02656 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.41□□□□□ -0.1
APOC3P02656 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOC3P02656 LSM4-201ENST00000252816 986 ntTSL 2 BASIC14.41□□□□□ -0.1
APOC3P02656 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOC3P02656 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOC3P02656 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOC3P02656 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOC3P02656 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOC3P02656 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOC3P02656 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOC3P02656 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOC3P02656 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOC3P02656 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOC3P02656 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
APOC3P02656 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOC3P02656 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOC3P02656 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOC3P02656 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOC3P02656 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
APOC3P02656 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.41□□□□□ -0.1
APOC3P02656 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOC3P02656 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.41□□□□□ -0.1
APOC3P02656 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOC3P02656 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOC3P02656 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOC3P02656 AC126177.1-201ENST00000547829 2218 ntBASIC14.41□□□□□ -0.1
APOC3P02656 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOC3P02656 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
APOC3P02656 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOC3P02656 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC14.41□□□□□ -0.1
APOC3P02656 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
APOC3P02656 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOC3P02656 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOC3P02656 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
APOC3P02656 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.4□□□□□ -0.1
APOC3P02656 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
APOC3P02656 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
APOC3P02656 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.4□□□□□ -0.1
APOC3P02656 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOC3P02656 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
APOC3P02656 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.4□□□□□ -0.1
APOC3P02656 AL009178.2-201ENST00000597278 2719 ntBASIC14.4□□□□□ -0.1
APOC3P02656 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
APOC3P02656 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOC3P02656 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOC3P02656 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC14.4□□□□□ -0.1
APOC3P02656 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
APOC3P02656 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC14.4□□□□□ -0.1
APOC3P02656 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC14.4□□□□□ -0.1
APOC3P02656 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC14.4□□□□□ -0.1
APOC3P02656 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
APOC3P02656 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOC3P02656 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOC3P02656 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
APOC3P02656 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
APOC3P02656 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOC3P02656 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOC3P02656 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.4□□□□□ -0.1
APOC3P02656 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC14.4□□□□□ -0.1
APOC3P02656 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
APOC3P02656 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOC3P02656 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
APOC3P02656 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC14.4□□□□□ -0.1
APOC3P02656 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.4□□□□□ -0.1
APOC3P02656 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
APOC3P02656 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
APOC3P02656 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.4□□□□□ -0.1
APOC3P02656 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
APOC3P02656 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOC3P02656 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.11
APOC3P02656 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOC3P02656 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
APOC3P02656 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.39□□□□□ -0.11
APOC3P02656 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOC3P02656 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOC3P02656 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
APOC3P02656 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
APOC3P02656 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
APOC3P02656 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms