Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV12-3P01733 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV12-3P01733 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV12-3P01733 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV12-3P01733 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV12-3P01733 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV12-3P01733 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV12-3P01733 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV12-3P01733 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV12-3P01733 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV12-3P01733 KRT8P47-201ENST00000604727 1398 ntBASIC13.85□□□□□ -0.19
TRBV12-3P01733 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV12-3P01733 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV12-3P01733 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV12-3P01733 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV12-3P01733 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC13.85□□□□□ -0.19
TRBV12-3P01733 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC13.85□□□□□ -0.19
TRBV12-3P01733 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV12-3P01733 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC13.85□□□□□ -0.19
TRBV12-3P01733 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV12-3P01733 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC13.85□□□□□ -0.19
TRBV12-3P01733 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV12-3P01733 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC13.85□□□□□ -0.19
TRBV12-3P01733 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC13.85□□□□□ -0.19
TRBV12-3P01733 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC13.85□□□□□ -0.19
TRBV12-3P01733 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC13.85□□□□□ -0.19
TRBV12-3P01733 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV12-3P01733 AC091607.1-201ENST00000490318 1060 ntBASIC13.85□□□□□ -0.19
TRBV12-3P01733 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC13.85□□□□□ -0.19
TRBV12-3P01733 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC13.85□□□□□ -0.19
TRBV12-3P01733 AC112698.1-201ENST00000510299 916 ntBASIC13.85□□□□□ -0.19
TRBV12-3P01733 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TRBV12-3P01733 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC13.85□□□□□ -0.19
TRBV12-3P01733 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC13.85□□□□□ -0.19
TRBV12-3P01733 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC13.85□□□□□ -0.19
TRBV12-3P01733 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV12-3P01733 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
TRBV12-3P01733 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV12-3P01733 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV12-3P01733 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC13.85□□□□□ -0.19
TRBV12-3P01733 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV12-3P01733 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC13.85□□□□□ -0.19
TRBV12-3P01733 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV12-3P01733 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV12-3P01733 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV12-3P01733 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TRBV12-3P01733 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV12-3P01733 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV12-3P01733 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC13.85□□□□□ -0.19
TRBV12-3P01733 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV12-3P01733 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TRBV12-3P01733 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TRBV12-3P01733 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV12-3P01733 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV12-3P01733 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV12-3P01733 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC13.84□□□□□ -0.19
TRBV12-3P01733 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC13.84□□□□□ -0.19
TRBV12-3P01733 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV12-3P01733 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV12-3P01733 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV12-3P01733 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC13.84□□□□□ -0.19
TRBV12-3P01733 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV12-3P01733 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
TRBV12-3P01733 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV12-3P01733 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV12-3P01733 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV12-3P01733 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV12-3P01733 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV12-3P01733 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV12-3P01733 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC13.84□□□□□ -0.19
TRBV12-3P01733 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC13.84□□□□□ -0.19
TRBV12-3P01733 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV12-3P01733 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV12-3P01733 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC13.84□□□□□ -0.19
TRBV12-3P01733 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC13.84□□□□□ -0.19
TRBV12-3P01733 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC13.84□□□□□ -0.19
TRBV12-3P01733 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC13.84□□□□□ -0.19
TRBV12-3P01733 NMU-205ENST00000511469 756 ntTSL 3 BASIC13.84□□□□□ -0.19
TRBV12-3P01733 NPAP1P7-201ENST00000613027 823 ntBASIC13.84□□□□□ -0.19
TRBV12-3P01733 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC13.84□□□□□ -0.19
TRBV12-3P01733 ANKRD20A8P-203ENST00000641373 517 ntBASIC13.84□□□□□ -0.19
TRBV12-3P01733 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV12-3P01733 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV12-3P01733 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TRBV12-3P01733 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
TRBV12-3P01733 AC008764.6-201ENST00000595909 2069 ntBASIC13.84□□□□□ -0.19
TRBV12-3P01733 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
TRBV12-3P01733 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TRBV12-3P01733 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC13.84□□□□□ -0.19
TRBV12-3P01733 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC13.84□□□□□ -0.19
TRBV12-3P01733 AC012317.2-201ENST00000623305 2251 ntBASIC13.84□□□□□ -0.19
TRBV12-3P01733 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV12-3P01733 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC13.84□□□□□ -0.19
TRBV12-3P01733 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV12-3P01733 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV12-3P01733 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV12-3P01733 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC13.84□□□□□ -0.19
TRBV12-3P01733 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV12-3P01733 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV12-3P01733 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms