Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PPP1R3DO95685 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PPP1R3DO95685 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PPP1R3DO95685 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.21■□□□□ 0.19
PPP1R3DO95685 SIRPAP1-201ENST00000448467 1770 ntBASIC16.21■□□□□ 0.19
PPP1R3DO95685 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.21■□□□□ 0.19
PPP1R3DO95685 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PPP1R3DO95685 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
PPP1R3DO95685 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.21■□□□□ 0.19
PPP1R3DO95685 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PPP1R3DO95685 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
PPP1R3DO95685 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PPP1R3DO95685 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PPP1R3DO95685 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PPP1R3DO95685 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PPP1R3DO95685 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
PPP1R3DO95685 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.21■□□□□ 0.19
PPP1R3DO95685 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PPP1R3DO95685 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PPP1R3DO95685 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.21■□□□□ 0.19
PPP1R3DO95685 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.21■□□□□ 0.19
PPP1R3DO95685 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PPP1R3DO95685 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.21■□□□□ 0.19
PPP1R3DO95685 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PPP1R3DO95685 MIR3917-201ENST00000580971 93 ntBASIC16.21■□□□□ 0.19
PPP1R3DO95685 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
PPP1R3DO95685 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.21■□□□□ 0.19
PPP1R3DO95685 FAM87A-204ENST00000613235 858 ntBASIC16.21■□□□□ 0.19
PPP1R3DO95685 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
PPP1R3DO95685 AC092865.7-201ENST00000641832 219 ntBASIC16.21■□□□□ 0.19
PPP1R3DO95685 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.21■□□□□ 0.19
PPP1R3DO95685 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PPP1R3DO95685 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
PPP1R3DO95685 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
PPP1R3DO95685 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.21■□□□□ 0.18
PPP1R3DO95685 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.21■□□□□ 0.18
PPP1R3DO95685 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
PPP1R3DO95685 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
PPP1R3DO95685 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.21■□□□□ 0.18
PPP1R3DO95685 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PPP1R3DO95685 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PPP1R3DO95685 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PPP1R3DO95685 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.2■□□□□ 0.18
PPP1R3DO95685 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PPP1R3DO95685 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PPP1R3DO95685 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PPP1R3DO95685 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PPP1R3DO95685 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PPP1R3DO95685 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PPP1R3DO95685 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PPP1R3DO95685 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.2■□□□□ 0.18
PPP1R3DO95685 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PPP1R3DO95685 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PPP1R3DO95685 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PPP1R3DO95685 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.2■□□□□ 0.18
PPP1R3DO95685 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.2■□□□□ 0.18
PPP1R3DO95685 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.2■□□□□ 0.18
PPP1R3DO95685 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
PPP1R3DO95685 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.2■□□□□ 0.18
PPP1R3DO95685 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
PPP1R3DO95685 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PPP1R3DO95685 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PPP1R3DO95685 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.2■□□□□ 0.18
PPP1R3DO95685 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.2■□□□□ 0.18
PPP1R3DO95685 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
PPP1R3DO95685 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PPP1R3DO95685 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PPP1R3DO95685 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PPP1R3DO95685 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.2■□□□□ 0.18
PPP1R3DO95685 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PPP1R3DO95685 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.2■□□□□ 0.18
PPP1R3DO95685 LINC00167-201ENST00000530583 1419 ntBASIC16.19■□□□□ 0.18
PPP1R3DO95685 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PPP1R3DO95685 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.19■□□□□ 0.18
PPP1R3DO95685 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PPP1R3DO95685 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PPP1R3DO95685 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PPP1R3DO95685 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.19■□□□□ 0.18
PPP1R3DO95685 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
PPP1R3DO95685 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PPP1R3DO95685 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.19■□□□□ 0.18
PPP1R3DO95685 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.19■□□□□ 0.18
PPP1R3DO95685 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PPP1R3DO95685 AC080080.1-201ENST00000625121 2420 ntBASIC16.19■□□□□ 0.18
PPP1R3DO95685 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PPP1R3DO95685 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PPP1R3DO95685 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PPP1R3DO95685 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
PPP1R3DO95685 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PPP1R3DO95685 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
PPP1R3DO95685 MMP23A-201ENST00000234610 1017 ntBASIC16.19■□□□□ 0.18
PPP1R3DO95685 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PPP1R3DO95685 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PPP1R3DO95685 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PPP1R3DO95685 HMGA1P5-201ENST00000412453 271 ntBASIC16.19■□□□□ 0.18
PPP1R3DO95685 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.19■□□□□ 0.18
PPP1R3DO95685 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PPP1R3DO95685 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.19■□□□□ 0.18
PPP1R3DO95685 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.19■□□□□ 0.18
PPP1R3DO95685 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms