Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC23.56■■□□□ 1.36
LTN1O94822 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
LTN1O94822 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC23.56■■□□□ 1.36
LTN1O94822 LBH-203ENST00000404397 543 ntTSL 4 BASIC23.56■■□□□ 1.36
LTN1O94822 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC23.56■■□□□ 1.36
LTN1O94822 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC23.56■■□□□ 1.36
LTN1O94822 CD63-210ENST00000550776 870 ntTSL 5 BASIC23.56■■□□□ 1.36
LTN1O94822 TMED1-207ENST00000591695 809 ntTSL 5 BASIC23.56■■□□□ 1.36
LTN1O94822 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC23.56■■□□□ 1.36
LTN1O94822 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
LTN1O94822 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
LTN1O94822 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
LTN1O94822 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC23.56■■□□□ 1.36
LTN1O94822 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
LTN1O94822 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
LTN1O94822 HARS-201ENST00000307633 1780 ntTSL 2 BASIC23.55■■□□□ 1.36
LTN1O94822 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
LTN1O94822 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC23.55■■□□□ 1.36
LTN1O94822 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
LTN1O94822 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
LTN1O94822 COX5BP2-201ENST00000392354 334 ntBASIC23.55■■□□□ 1.36
LTN1O94822 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
LTN1O94822 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC23.55■■□□□ 1.36
LTN1O94822 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC23.55■■□□□ 1.36
LTN1O94822 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC23.55■■□□□ 1.36
LTN1O94822 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC23.55■■□□□ 1.36
LTN1O94822 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
LTN1O94822 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
LTN1O94822 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
LTN1O94822 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
LTN1O94822 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
LTN1O94822 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
LTN1O94822 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
LTN1O94822 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
LTN1O94822 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC23.55■■□□□ 1.36
LTN1O94822 MKNK2P1-201ENST00000437526 628 ntBASIC23.55■■□□□ 1.36
LTN1O94822 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC23.55■■□□□ 1.36
LTN1O94822 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
LTN1O94822 WIZP1-201ENST00000531444 2299 ntBASIC23.54■■□□□ 1.36
LTN1O94822 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
LTN1O94822 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
LTN1O94822 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
LTN1O94822 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
LTN1O94822 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
LTN1O94822 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC23.54■■□□□ 1.36
LTN1O94822 IGHV3-65-201ENST00000523210 341 ntBASIC23.54■■□□□ 1.36
LTN1O94822 MAL2-202ENST00000531508 892 ntTSL 3 BASIC23.54■■□□□ 1.36
LTN1O94822 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
LTN1O94822 AL596442.2-201ENST00000610240 980 ntBASIC23.54■■□□□ 1.36
LTN1O94822 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC23.54■■□□□ 1.36
LTN1O94822 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
LTN1O94822 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC23.54■■□□□ 1.36
LTN1O94822 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC23.54■■□□□ 1.36
LTN1O94822 ELL2P1-201ENST00000413990 1906 ntBASIC23.54■■□□□ 1.36
LTN1O94822 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
LTN1O94822 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
LTN1O94822 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
LTN1O94822 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
LTN1O94822 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
LTN1O94822 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC23.53■■□□□ 1.36
LTN1O94822 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
LTN1O94822 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC23.53■■□□□ 1.36
LTN1O94822 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
LTN1O94822 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC23.53■■□□□ 1.36
LTN1O94822 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
LTN1O94822 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
LTN1O94822 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
LTN1O94822 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC23.53■■□□□ 1.36
LTN1O94822 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC23.53■■□□□ 1.36
LTN1O94822 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
LTN1O94822 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
LTN1O94822 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC23.53■■□□□ 1.36
LTN1O94822 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
LTN1O94822 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC23.53■■□□□ 1.36
LTN1O94822 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC23.52■■□□□ 1.36
LTN1O94822 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
LTN1O94822 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC23.52■■□□□ 1.36
LTN1O94822 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC23.52■■□□□ 1.36
LTN1O94822 STK25P1-201ENST00000585406 838 ntBASIC23.52■■□□□ 1.36
LTN1O94822 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC23.52■■□□□ 1.36
LTN1O94822 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC23.52■■□□□ 1.36
LTN1O94822 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
LTN1O94822 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
LTN1O94822 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
LTN1O94822 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
LTN1O94822 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC23.52■■□□□ 1.36
LTN1O94822 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
LTN1O94822 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC23.52■■□□□ 1.36
LTN1O94822 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC23.52■■□□□ 1.36
LTN1O94822 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
LTN1O94822 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC23.52■■□□□ 1.35
LTN1O94822 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
LTN1O94822 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC23.51■■□□□ 1.35
LTN1O94822 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC23.51■■□□□ 1.35
LTN1O94822 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
LTN1O94822 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC23.51■■□□□ 1.35
LTN1O94822 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
LTN1O94822 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC23.51■■□□□ 1.35
LTN1O94822 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
LTN1O94822 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms