Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDKL5O76039 PCDHB18P-201ENST00000524813 2368 ntBASIC20.85■□□□□ 0.93
CDKL5O76039 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDKL5O76039 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDKL5O76039 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDKL5O76039 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CDKL5O76039 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.84■□□□□ 0.93
CDKL5O76039 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.84■□□□□ 0.93
CDKL5O76039 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.84■□□□□ 0.93
CDKL5O76039 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDKL5O76039 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDKL5O76039 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC20.84■□□□□ 0.93
CDKL5O76039 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CDKL5O76039 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CDKL5O76039 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDKL5O76039 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDKL5O76039 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDKL5O76039 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.84■□□□□ 0.93
CDKL5O76039 FAM210CP-201ENST00000445714 574 ntBASIC20.84■□□□□ 0.93
CDKL5O76039 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.84■□□□□ 0.93
CDKL5O76039 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.84■□□□□ 0.93
CDKL5O76039 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CDKL5O76039 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDKL5O76039 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.84■□□□□ 0.93
CDKL5O76039 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CDKL5O76039 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.84■□□□□ 0.93
CDKL5O76039 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CDKL5O76039 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDKL5O76039 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC20.83■□□□□ 0.93
CDKL5O76039 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDKL5O76039 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDKL5O76039 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CDKL5O76039 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDKL5O76039 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDKL5O76039 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDKL5O76039 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CDKL5O76039 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDKL5O76039 AC005332.8-201ENST00000622750 2735 ntBASIC20.83■□□□□ 0.93
CDKL5O76039 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDKL5O76039 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDKL5O76039 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.83■□□□□ 0.93
CDKL5O76039 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDKL5O76039 AC112698.1-201ENST00000510299 916 ntBASIC20.83■□□□□ 0.93
CDKL5O76039 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.83■□□□□ 0.93
CDKL5O76039 AL049597.2-201ENST00000565575 961 ntBASIC20.83■□□□□ 0.93
CDKL5O76039 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.83■□□□□ 0.93
CDKL5O76039 RNF126P1-202ENST00000569893 925 ntBASIC20.83■□□□□ 0.93
CDKL5O76039 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CDKL5O76039 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDKL5O76039 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDKL5O76039 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.92
CDKL5O76039 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDKL5O76039 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDKL5O76039 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDKL5O76039 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDKL5O76039 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CDKL5O76039 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CDKL5O76039 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.82■□□□□ 0.92
CDKL5O76039 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDKL5O76039 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CDKL5O76039 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDKL5O76039 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDKL5O76039 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDKL5O76039 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDKL5O76039 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.82■□□□□ 0.92
CDKL5O76039 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.82■□□□□ 0.92
CDKL5O76039 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.82■□□□□ 0.92
CDKL5O76039 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.82■□□□□ 0.92
CDKL5O76039 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.82■□□□□ 0.92
CDKL5O76039 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDKL5O76039 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
CDKL5O76039 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CDKL5O76039 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.82■□□□□ 0.92
CDKL5O76039 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDKL5O76039 KRT8P47-201ENST00000604727 1398 ntBASIC20.82■□□□□ 0.92
CDKL5O76039 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDKL5O76039 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CDKL5O76039 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDKL5O76039 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDKL5O76039 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDKL5O76039 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDKL5O76039 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDKL5O76039 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CDKL5O76039 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDKL5O76039 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CDKL5O76039 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDKL5O76039 DDX43P3-201ENST00000441064 443 ntBASIC20.81■□□□□ 0.92
CDKL5O76039 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDKL5O76039 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDKL5O76039 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.81■□□□□ 0.92
CDKL5O76039 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.81■□□□□ 0.92
CDKL5O76039 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.81■□□□□ 0.92
CDKL5O76039 AL136038.3-201ENST00000561909 1096 ntBASIC20.81■□□□□ 0.92
CDKL5O76039 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.81■□□□□ 0.92
CDKL5O76039 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.81■□□□□ 0.92
CDKL5O76039 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDKL5O76039 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDKL5O76039 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDKL5O76039 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDKL5O76039 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms