Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
IDH3BO43837 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
IDH3BO43837 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
IDH3BO43837 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.49■□□□□ 0.23
IDH3BO43837 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
IDH3BO43837 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
IDH3BO43837 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
IDH3BO43837 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
IDH3BO43837 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
IDH3BO43837 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.49■□□□□ 0.23
IDH3BO43837 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IDH3BO43837 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
IDH3BO43837 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
IDH3BO43837 AC009102.3-201ENST00000623118 1491 ntBASIC16.48■□□□□ 0.23
IDH3BO43837 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
IDH3BO43837 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
IDH3BO43837 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IDH3BO43837 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.48■□□□□ 0.23
IDH3BO43837 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.48■□□□□ 0.23
IDH3BO43837 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IDH3BO43837 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
IDH3BO43837 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IDH3BO43837 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
IDH3BO43837 AL096828.2-201ENST00000567259 1965 ntBASIC16.48■□□□□ 0.23
IDH3BO43837 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IDH3BO43837 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.48■□□□□ 0.23
IDH3BO43837 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
IDH3BO43837 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.48■□□□□ 0.23
IDH3BO43837 AC134043.2-201ENST00000624206 2238 ntBASIC16.48■□□□□ 0.23
IDH3BO43837 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.48■□□□□ 0.23
IDH3BO43837 PRORSD1P-201ENST00000295112 541 ntBASIC16.48■□□□□ 0.23
IDH3BO43837 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IDH3BO43837 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
IDH3BO43837 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.48■□□□□ 0.23
IDH3BO43837 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.48■□□□□ 0.23
IDH3BO43837 AC113410.3-201ENST00000623366 203 ntBASIC16.48■□□□□ 0.23
IDH3BO43837 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
IDH3BO43837 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
IDH3BO43837 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IDH3BO43837 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
IDH3BO43837 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
IDH3BO43837 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.48■□□□□ 0.23
IDH3BO43837 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
IDH3BO43837 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IDH3BO43837 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
IDH3BO43837 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IDH3BO43837 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IDH3BO43837 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.48■□□□□ 0.23
IDH3BO43837 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
IDH3BO43837 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IDH3BO43837 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.48■□□□□ 0.23
IDH3BO43837 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
IDH3BO43837 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IDH3BO43837 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.48■□□□□ 0.23
IDH3BO43837 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
IDH3BO43837 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
IDH3BO43837 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
IDH3BO43837 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
IDH3BO43837 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
IDH3BO43837 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
IDH3BO43837 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
IDH3BO43837 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
IDH3BO43837 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
IDH3BO43837 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
IDH3BO43837 PHGDH-209ENST00000641074 1780 ntBASIC16.47■□□□□ 0.23
IDH3BO43837 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
IDH3BO43837 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
IDH3BO43837 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
IDH3BO43837 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
IDH3BO43837 SLC25A1P2-201ENST00000430693 912 ntBASIC16.47■□□□□ 0.23
IDH3BO43837 TSPY17P-201ENST00000450329 467 ntBASIC16.47■□□□□ 0.23
IDH3BO43837 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.47■□□□□ 0.23
IDH3BO43837 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
IDH3BO43837 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.47■□□□□ 0.23
IDH3BO43837 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.47■□□□□ 0.23
IDH3BO43837 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.47■□□□□ 0.23
IDH3BO43837 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
IDH3BO43837 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
IDH3BO43837 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
IDH3BO43837 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
IDH3BO43837 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
IDH3BO43837 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
IDH3BO43837 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
IDH3BO43837 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.47■□□□□ 0.23
IDH3BO43837 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
IDH3BO43837 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.47■□□□□ 0.23
IDH3BO43837 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
IDH3BO43837 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
IDH3BO43837 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
IDH3BO43837 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
IDH3BO43837 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
IDH3BO43837 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
IDH3BO43837 SDHAP2-201ENST00000455183 2001 ntBASIC16.46■□□□□ 0.23
IDH3BO43837 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.46■□□□□ 0.23
IDH3BO43837 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
IDH3BO43837 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IDH3BO43837 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.46■□□□□ 0.23
IDH3BO43837 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.46■□□□□ 0.23
IDH3BO43837 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.46■□□□□ 0.23
IDH3BO43837 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms