Protein–RNA interactions for Protein: O14828

SCAMP3, Secretory carrier-associated membrane protein 3, humanhuman

Known RBP Predictions only

Length 347 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3O14828 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SCAMP3O14828 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCAMP3O14828 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.51■□□□□ 0.55
SCAMP3O14828 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SCAMP3O14828 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
SCAMP3O14828 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.51■□□□□ 0.55
SCAMP3O14828 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SCAMP3O14828 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.51■□□□□ 0.55
SCAMP3O14828 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SCAMP3O14828 KRT8P47-201ENST00000604727 1398 ntBASIC18.51■□□□□ 0.55
SCAMP3O14828 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCAMP3O14828 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
SCAMP3O14828 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SCAMP3O14828 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SCAMP3O14828 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCAMP3O14828 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SCAMP3O14828 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
SCAMP3O14828 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SCAMP3O14828 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCAMP3O14828 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.5■□□□□ 0.55
SCAMP3O14828 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.5■□□□□ 0.55
SCAMP3O14828 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCAMP3O14828 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCAMP3O14828 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SCAMP3O14828 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
SCAMP3O14828 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCAMP3O14828 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCAMP3O14828 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SCAMP3O14828 AC093010.1-201ENST00000473625 1624 ntBASIC18.5■□□□□ 0.55
SCAMP3O14828 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SCAMP3O14828 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCAMP3O14828 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.5■□□□□ 0.55
SCAMP3O14828 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCAMP3O14828 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCAMP3O14828 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.5■□□□□ 0.55
SCAMP3O14828 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
SCAMP3O14828 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SCAMP3O14828 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.5■□□□□ 0.55
SCAMP3O14828 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCAMP3O14828 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCAMP3O14828 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.5■□□□□ 0.55
SCAMP3O14828 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCAMP3O14828 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
SCAMP3O14828 FGFR3P6-201ENST00000457012 610 ntBASIC18.5■□□□□ 0.55
SCAMP3O14828 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.5■□□□□ 0.55
SCAMP3O14828 RNA5SP419-201ENST00000515908 135 ntBASIC18.5■□□□□ 0.55
SCAMP3O14828 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.5■□□□□ 0.55
SCAMP3O14828 AL662844.1-201ENST00000546340 181 ntBASIC18.5■□□□□ 0.55
SCAMP3O14828 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.5■□□□□ 0.55
SCAMP3O14828 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCAMP3O14828 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.5■□□□□ 0.55
SCAMP3O14828 AC011467.2-201ENST00000598425 242 ntBASIC18.5■□□□□ 0.55
SCAMP3O14828 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.5■□□□□ 0.55
SCAMP3O14828 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.5■□□□□ 0.55
SCAMP3O14828 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.5■□□□□ 0.55
SCAMP3O14828 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SCAMP3O14828 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SCAMP3O14828 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SCAMP3O14828 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCAMP3O14828 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.5■□□□□ 0.55
SCAMP3O14828 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SCAMP3O14828 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SCAMP3O14828 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SCAMP3O14828 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCAMP3O14828 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCAMP3O14828 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCAMP3O14828 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SCAMP3O14828 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.49■□□□□ 0.55
SCAMP3O14828 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.49■□□□□ 0.55
SCAMP3O14828 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SCAMP3O14828 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.49■□□□□ 0.55
SCAMP3O14828 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SCAMP3O14828 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SCAMP3O14828 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SCAMP3O14828 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCAMP3O14828 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.49■□□□□ 0.55
SCAMP3O14828 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCAMP3O14828 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCAMP3O14828 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.49■□□□□ 0.55
SCAMP3O14828 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
SCAMP3O14828 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.49■□□□□ 0.55
SCAMP3O14828 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCAMP3O14828 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCAMP3O14828 AL590627.1-203ENST00000421194 1026 ntBASIC18.49■□□□□ 0.55
SCAMP3O14828 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SCAMP3O14828 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
SCAMP3O14828 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.49■□□□□ 0.55
SCAMP3O14828 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.49■□□□□ 0.55
SCAMP3O14828 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.49■□□□□ 0.55
SCAMP3O14828 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.49■□□□□ 0.55
SCAMP3O14828 AL355877.3-201ENST00000622820 899 ntBASIC18.49■□□□□ 0.55
SCAMP3O14828 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCAMP3O14828 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SCAMP3O14828 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCAMP3O14828 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCAMP3O14828 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCAMP3O14828 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCAMP3O14828 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCAMP3O14828 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SCAMP3O14828 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms