Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TAF4O00268 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TAF4O00268 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TAF4O00268 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TAF4O00268 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TAF4O00268 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TAF4O00268 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.55■□□□□ 0.4
TAF4O00268 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
TAF4O00268 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TAF4O00268 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TAF4O00268 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TAF4O00268 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.55■□□□□ 0.4
TAF4O00268 POM121L3P-201ENST00000419331 1163 ntBASIC17.55■□□□□ 0.4
TAF4O00268 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
TAF4O00268 HLA-J-202ENST00000469281 1241 ntBASIC17.55■□□□□ 0.4
TAF4O00268 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.55■□□□□ 0.4
TAF4O00268 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.55■□□□□ 0.4
TAF4O00268 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TAF4O00268 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TAF4O00268 AC092364.2-202ENST00000597012 1073 ntBASIC17.55■□□□□ 0.4
TAF4O00268 AC008608.2-201ENST00000606089 416 ntBASIC17.55■□□□□ 0.4
TAF4O00268 AC090164.3-201ENST00000610780 2143 ntBASIC17.55■□□□□ 0.4
TAF4O00268 FAM197Y3-203ENST00000618346 717 ntBASIC17.55■□□□□ 0.4
TAF4O00268 AL355877.3-201ENST00000622820 899 ntBASIC17.55■□□□□ 0.4
TAF4O00268 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TAF4O00268 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TAF4O00268 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.55■□□□□ 0.4
TAF4O00268 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.55■□□□□ 0.4
TAF4O00268 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.55■□□□□ 0.4
TAF4O00268 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TAF4O00268 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.55■□□□□ 0.4
TAF4O00268 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TAF4O00268 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.55■□□□□ 0.4
TAF4O00268 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TAF4O00268 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.55■□□□□ 0.4
TAF4O00268 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TAF4O00268 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.55■□□□□ 0.4
TAF4O00268 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TAF4O00268 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TAF4O00268 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TAF4O00268 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TAF4O00268 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TAF4O00268 AC012313.1-201ENST00000593393 3059 ntBASIC17.54■□□□□ 0.4
TAF4O00268 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TAF4O00268 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.54■□□□□ 0.4
TAF4O00268 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TAF4O00268 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.54■□□□□ 0.4
TAF4O00268 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
TAF4O00268 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.54■□□□□ 0.4
TAF4O00268 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TAF4O00268 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TAF4O00268 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
TAF4O00268 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TAF4O00268 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TAF4O00268 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TAF4O00268 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TAF4O00268 AL035633.1-201ENST00000406139 838 ntBASIC17.54■□□□□ 0.4
TAF4O00268 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.54■□□□□ 0.4
TAF4O00268 MINOS1P3-201ENST00000457048 203 ntBASIC17.54■□□□□ 0.4
TAF4O00268 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
TAF4O00268 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.54■□□□□ 0.4
TAF4O00268 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.54■□□□□ 0.4
TAF4O00268 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.54■□□□□ 0.4
TAF4O00268 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.54■□□□□ 0.4
TAF4O00268 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TAF4O00268 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TAF4O00268 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TAF4O00268 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TAF4O00268 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TAF4O00268 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.54■□□□□ 0.4
TAF4O00268 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TAF4O00268 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TAF4O00268 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.54■□□□□ 0.4
TAF4O00268 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.54■□□□□ 0.4
TAF4O00268 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TAF4O00268 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TAF4O00268 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
TAF4O00268 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.53■□□□□ 0.4
TAF4O00268 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TAF4O00268 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TAF4O00268 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.53■□□□□ 0.4
TAF4O00268 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TAF4O00268 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TAF4O00268 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TAF4O00268 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TAF4O00268 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TAF4O00268 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TAF4O00268 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TAF4O00268 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TAF4O00268 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.53■□□□□ 0.4
TAF4O00268 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
TAF4O00268 MED15P5-201ENST00000423150 992 ntBASIC17.53■□□□□ 0.4
TAF4O00268 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.53■□□□□ 0.4
TAF4O00268 KRT18P23-201ENST00000435622 1283 ntBASIC17.53■□□□□ 0.4
TAF4O00268 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TAF4O00268 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.53■□□□□ 0.4
TAF4O00268 GUSBP12-201ENST00000513727 720 ntBASIC17.53■□□□□ 0.4
TAF4O00268 IGHV3-22-201ENST00000520721 359 ntBASIC17.53■□□□□ 0.4
TAF4O00268 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.53■□□□□ 0.4
TAF4O00268 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms