Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
AP3B1O00203 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.12■□□□□ 0.49
AP3B1O00203 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
AP3B1O00203 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
AP3B1O00203 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.12■□□□□ 0.49
AP3B1O00203 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
AP3B1O00203 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.12■□□□□ 0.49
AP3B1O00203 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.12■□□□□ 0.49
AP3B1O00203 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
AP3B1O00203 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP3B1O00203 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.12■□□□□ 0.49
AP3B1O00203 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP3B1O00203 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
AP3B1O00203 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.12■□□□□ 0.49
AP3B1O00203 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP3B1O00203 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
AP3B1O00203 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.12■□□□□ 0.49
AP3B1O00203 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP3B1O00203 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
AP3B1O00203 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.12■□□□□ 0.49
AP3B1O00203 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
AP3B1O00203 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP3B1O00203 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.12■□□□□ 0.49
AP3B1O00203 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP3B1O00203 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP3B1O00203 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP3B1O00203 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP3B1O00203 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP3B1O00203 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
AP3B1O00203 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP3B1O00203 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP3B1O00203 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP3B1O00203 TERF1P1-201ENST00000311003 1181 ntBASIC18.11■□□□□ 0.49
AP3B1O00203 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP3B1O00203 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP3B1O00203 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
AP3B1O00203 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
AP3B1O00203 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
AP3B1O00203 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
AP3B1O00203 YBX1P2-201ENST00000489612 999 ntBASIC18.11■□□□□ 0.49
AP3B1O00203 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
AP3B1O00203 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP3B1O00203 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.11■□□□□ 0.49
AP3B1O00203 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.11■□□□□ 0.49
AP3B1O00203 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP3B1O00203 AC011558.1-201ENST00000623459 338 ntBASIC18.11■□□□□ 0.49
AP3B1O00203 AC079602.3-201ENST00000623931 403 ntBASIC18.11■□□□□ 0.49
AP3B1O00203 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
AP3B1O00203 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP3B1O00203 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
AP3B1O00203 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.11■□□□□ 0.49
AP3B1O00203 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.11■□□□□ 0.49
AP3B1O00203 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.11■□□□□ 0.49
AP3B1O00203 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
AP3B1O00203 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP3B1O00203 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP3B1O00203 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.11■□□□□ 0.49
AP3B1O00203 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP3B1O00203 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
AP3B1O00203 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
AP3B1O00203 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP3B1O00203 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
AP3B1O00203 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
AP3B1O00203 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
AP3B1O00203 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
AP3B1O00203 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
AP3B1O00203 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
AP3B1O00203 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.1■□□□□ 0.49
AP3B1O00203 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP3B1O00203 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
AP3B1O00203 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
AP3B1O00203 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP3B1O00203 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.1■□□□□ 0.49
AP3B1O00203 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
AP3B1O00203 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
AP3B1O00203 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
AP3B1O00203 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP3B1O00203 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.1■□□□□ 0.49
AP3B1O00203 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
AP3B1O00203 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.1■□□□□ 0.49
AP3B1O00203 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.1■□□□□ 0.49
AP3B1O00203 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.1■□□□□ 0.49
AP3B1O00203 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
AP3B1O00203 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
AP3B1O00203 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.1■□□□□ 0.49
AP3B1O00203 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP3B1O00203 AC100803.2-201ENST00000562459 1963 ntBASIC18.1■□□□□ 0.49
AP3B1O00203 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
AP3B1O00203 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
AP3B1O00203 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
AP3B1O00203 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.09■□□□□ 0.49
AP3B1O00203 AL138688.1-201ENST00000624851 1594 ntBASIC18.09■□□□□ 0.49
AP3B1O00203 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP3B1O00203 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
AP3B1O00203 AC073508.3-201ENST00000619697 1419 ntBASIC18.09■□□□□ 0.49
AP3B1O00203 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.09■□□□□ 0.49
AP3B1O00203 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP3B1O00203 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP3B1O00203 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.09■□□□□ 0.49
AP3B1O00203 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms