Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
MBD3L4A6NDZ8 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MBD3L4A6NDZ8 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
MBD3L4A6NDZ8 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MBD3L4A6NDZ8 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MBD3L4A6NDZ8 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC15.68■□□□□ 0.1
MBD3L4A6NDZ8 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC15.68■□□□□ 0.1
MBD3L4A6NDZ8 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MBD3L4A6NDZ8 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
MBD3L4A6NDZ8 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MBD3L4A6NDZ8 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MBD3L4A6NDZ8 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
MBD3L4A6NDZ8 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MBD3L4A6NDZ8 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.68■□□□□ 0.1
MBD3L4A6NDZ8 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MBD3L4A6NDZ8 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
MBD3L4A6NDZ8 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.68■□□□□ 0.1
MBD3L4A6NDZ8 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.68■□□□□ 0.1
MBD3L4A6NDZ8 BX005266.1-201ENST00000473402 457 ntBASIC15.68■□□□□ 0.1
MBD3L4A6NDZ8 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.68■□□□□ 0.1
MBD3L4A6NDZ8 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MBD3L4A6NDZ8 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.68■□□□□ 0.1
MBD3L4A6NDZ8 AC145285.3-201ENST00000564603 959 ntBASIC15.68■□□□□ 0.1
MBD3L4A6NDZ8 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MBD3L4A6NDZ8 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MBD3L4A6NDZ8 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MBD3L4A6NDZ8 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MBD3L4A6NDZ8 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MBD3L4A6NDZ8 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
MBD3L4A6NDZ8 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
MBD3L4A6NDZ8 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.68■□□□□ 0.1
MBD3L4A6NDZ8 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.68■□□□□ 0.1
MBD3L4A6NDZ8 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
MBD3L4A6NDZ8 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MBD3L4A6NDZ8 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.68■□□□□ 0.1
MBD3L4A6NDZ8 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MBD3L4A6NDZ8 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
MBD3L4A6NDZ8 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC15.68■□□□□ 0.1
MBD3L4A6NDZ8 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
MBD3L4A6NDZ8 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MBD3L4A6NDZ8 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
MBD3L4A6NDZ8 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.67■□□□□ 0.1
MBD3L4A6NDZ8 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MBD3L4A6NDZ8 AL049757.1-201ENST00000616842 1596 ntBASIC15.67■□□□□ 0.1
MBD3L4A6NDZ8 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC15.67■□□□□ 0.1
MBD3L4A6NDZ8 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.67■□□□□ 0.1
MBD3L4A6NDZ8 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MBD3L4A6NDZ8 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MBD3L4A6NDZ8 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MBD3L4A6NDZ8 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
MBD3L4A6NDZ8 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MBD3L4A6NDZ8 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC15.67■□□□□ 0.1
MBD3L4A6NDZ8 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.67■□□□□ 0.1
MBD3L4A6NDZ8 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
MBD3L4A6NDZ8 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MBD3L4A6NDZ8 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.67■□□□□ 0.1
MBD3L4A6NDZ8 AC092910.1-201ENST00000482027 1129 ntBASIC15.67■□□□□ 0.1
MBD3L4A6NDZ8 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.67■□□□□ 0.1
MBD3L4A6NDZ8 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MBD3L4A6NDZ8 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.67■□□□□ 0.1
MBD3L4A6NDZ8 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.67■□□□□ 0.1
MBD3L4A6NDZ8 AC105339.3-201ENST00000560043 636 ntBASIC15.67■□□□□ 0.1
MBD3L4A6NDZ8 AC012640.2-201ENST00000561606 901 ntBASIC15.67■□□□□ 0.1
MBD3L4A6NDZ8 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.67■□□□□ 0.1
MBD3L4A6NDZ8 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.67■□□□□ 0.1
MBD3L4A6NDZ8 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.67■□□□□ 0.1
MBD3L4A6NDZ8 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MBD3L4A6NDZ8 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MBD3L4A6NDZ8 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MBD3L4A6NDZ8 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.67■□□□□ 0.1
MBD3L4A6NDZ8 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.67■□□□□ 0.1
MBD3L4A6NDZ8 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MBD3L4A6NDZ8 BX276092.7-203ENST00000637198 1536 ntBASIC15.67■□□□□ 0.1
MBD3L4A6NDZ8 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
MBD3L4A6NDZ8 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC15.67■□□□□ 0.1
MBD3L4A6NDZ8 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
MBD3L4A6NDZ8 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MBD3L4A6NDZ8 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
MBD3L4A6NDZ8 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MBD3L4A6NDZ8 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MBD3L4A6NDZ8 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MBD3L4A6NDZ8 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
MBD3L4A6NDZ8 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
MBD3L4A6NDZ8 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MBD3L4A6NDZ8 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MBD3L4A6NDZ8 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.66■□□□□ 0.1
MBD3L4A6NDZ8 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC15.66■□□□□ 0.1
MBD3L4A6NDZ8 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MBD3L4A6NDZ8 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MBD3L4A6NDZ8 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
MBD3L4A6NDZ8 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
MBD3L4A6NDZ8 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
MBD3L4A6NDZ8 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.66■□□□□ 0.1
MBD3L4A6NDZ8 AL020989.1-201ENST00000422979 469 ntBASIC15.66■□□□□ 0.1
MBD3L4A6NDZ8 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.66■□□□□ 0.1
MBD3L4A6NDZ8 AC098831.1-202ENST00000438821 336 ntBASIC15.66■□□□□ 0.1
MBD3L4A6NDZ8 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.66■□□□□ 0.1
MBD3L4A6NDZ8 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.66■□□□□ 0.1
MBD3L4A6NDZ8 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.66■□□□□ 0.1
MBD3L4A6NDZ8 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms