Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CCDC66A2RUB6 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC66A2RUB6 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC66A2RUB6 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC66A2RUB6 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC66A2RUB6 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CCDC66A2RUB6 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CCDC66A2RUB6 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC66A2RUB6 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC66A2RUB6 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CCDC66A2RUB6 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC66A2RUB6 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC66A2RUB6 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC66A2RUB6 AP000593.1-201ENST00000393668 712 ntBASIC19.43■□□□□ 0.7
CCDC66A2RUB6 MESTP1-201ENST00000404287 994 ntBASIC19.43■□□□□ 0.7
CCDC66A2RUB6 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CCDC66A2RUB6 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.43■□□□□ 0.7
CCDC66A2RUB6 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.43■□□□□ 0.7
CCDC66A2RUB6 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC66A2RUB6 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC66A2RUB6 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CCDC66A2RUB6 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC66A2RUB6 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CCDC66A2RUB6 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC66A2RUB6 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC66A2RUB6 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC66A2RUB6 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC66A2RUB6 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
CCDC66A2RUB6 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC66A2RUB6 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC66A2RUB6 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CCDC66A2RUB6 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC66A2RUB6 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC66A2RUB6 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC66A2RUB6 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC66A2RUB6 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC66A2RUB6 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC66A2RUB6 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC66A2RUB6 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC66A2RUB6 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CCDC66A2RUB6 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC66A2RUB6 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC66A2RUB6 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CCDC66A2RUB6 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC66A2RUB6 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CCDC66A2RUB6 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CCDC66A2RUB6 MIR564-202ENST00000385049 94 ntBASIC19.42■□□□□ 0.7
CCDC66A2RUB6 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.42■□□□□ 0.7
CCDC66A2RUB6 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CCDC66A2RUB6 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC66A2RUB6 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC66A2RUB6 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
CCDC66A2RUB6 AC008622.2-201ENST00000617006 1229 ntBASIC19.42■□□□□ 0.7
CCDC66A2RUB6 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CCDC66A2RUB6 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC66A2RUB6 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC66A2RUB6 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC66A2RUB6 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC66A2RUB6 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC66A2RUB6 AC092850.2-201ENST00000623821 2697 ntBASIC19.42■□□□□ 0.7
CCDC66A2RUB6 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC66A2RUB6 AC096733.2-201ENST00000609937 1394 ntBASIC19.42■□□□□ 0.7
CCDC66A2RUB6 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC66A2RUB6 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC66A2RUB6 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC66A2RUB6 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CCDC66A2RUB6 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC19.41■□□□□ 0.7
CCDC66A2RUB6 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC66A2RUB6 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC66A2RUB6 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC66A2RUB6 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CCDC66A2RUB6 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
CCDC66A2RUB6 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC19.41■□□□□ 0.7
CCDC66A2RUB6 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CCDC66A2RUB6 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
CCDC66A2RUB6 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC66A2RUB6 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.41■□□□□ 0.7
CCDC66A2RUB6 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC66A2RUB6 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
CCDC66A2RUB6 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CCDC66A2RUB6 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC66A2RUB6 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC66A2RUB6 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC66A2RUB6 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC66A2RUB6 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.41■□□□□ 0.7
CCDC66A2RUB6 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CCDC66A2RUB6 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC66A2RUB6 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC66A2RUB6 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC66A2RUB6 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CCDC66A2RUB6 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC66A2RUB6 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC66A2RUB6 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CCDC66A2RUB6 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CCDC66A2RUB6 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CCDC66A2RUB6 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC66A2RUB6 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC66A2RUB6 AL135905.2-201ENST00000584934 1404 ntBASIC19.41■□□□□ 0.7
CCDC66A2RUB6 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
CCDC66A2RUB6 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms