Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TCRBV9S1A1TA0A576 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
TCRBV9S1A1TA0A576 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.05■□□□□ 0.48
TCRBV9S1A1TA0A576 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.05■□□□□ 0.48
TCRBV9S1A1TA0A576 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TCRBV9S1A1TA0A576 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TCRBV9S1A1TA0A576 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.05■□□□□ 0.48
TCRBV9S1A1TA0A576 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.05■□□□□ 0.48
TCRBV9S1A1TA0A576 SNORA78-201ENST00000459373 127 ntBASIC18.05■□□□□ 0.48
TCRBV9S1A1TA0A576 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.05■□□□□ 0.48
TCRBV9S1A1TA0A576 AC128688.1-201ENST00000487626 519 ntBASIC18.05■□□□□ 0.48
TCRBV9S1A1TA0A576 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.05■□□□□ 0.48
TCRBV9S1A1TA0A576 AC092865.7-201ENST00000641832 219 ntBASIC18.05■□□□□ 0.48
TCRBV9S1A1TA0A576 REXO1L11P-201ENST00000620964 1927 ntBASIC18.05■□□□□ 0.48
TCRBV9S1A1TA0A576 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TCRBV9S1A1TA0A576 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.05■□□□□ 0.48
TCRBV9S1A1TA0A576 KRT8P9-201ENST00000558927 1449 ntBASIC18.05■□□□□ 0.48
TCRBV9S1A1TA0A576 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.05■□□□□ 0.48
TCRBV9S1A1TA0A576 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TCRBV9S1A1TA0A576 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TCRBV9S1A1TA0A576 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TCRBV9S1A1TA0A576 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TCRBV9S1A1TA0A576 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TCRBV9S1A1TA0A576 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
TCRBV9S1A1TA0A576 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.05■□□□□ 0.48
TCRBV9S1A1TA0A576 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TCRBV9S1A1TA0A576 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TCRBV9S1A1TA0A576 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.04■□□□□ 0.48
TCRBV9S1A1TA0A576 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TCRBV9S1A1TA0A576 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
TCRBV9S1A1TA0A576 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TCRBV9S1A1TA0A576 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TCRBV9S1A1TA0A576 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.04■□□□□ 0.48
TCRBV9S1A1TA0A576 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
TCRBV9S1A1TA0A576 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TCRBV9S1A1TA0A576 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
TCRBV9S1A1TA0A576 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.04■□□□□ 0.48
TCRBV9S1A1TA0A576 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.04■□□□□ 0.48
TCRBV9S1A1TA0A576 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.04■□□□□ 0.48
TCRBV9S1A1TA0A576 PVRIG2P-201ENST00000435460 978 ntBASIC18.04■□□□□ 0.48
TCRBV9S1A1TA0A576 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.04■□□□□ 0.48
TCRBV9S1A1TA0A576 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
TCRBV9S1A1TA0A576 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TCRBV9S1A1TA0A576 NEK4P2-201ENST00000580004 1012 ntBASIC18.04■□□□□ 0.48
TCRBV9S1A1TA0A576 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.04■□□□□ 0.48
TCRBV9S1A1TA0A576 FAM87A-204ENST00000613235 858 ntBASIC18.04■□□□□ 0.48
TCRBV9S1A1TA0A576 AC084018.2-201ENST00000613093 2607 ntBASIC18.04■□□□□ 0.48
TCRBV9S1A1TA0A576 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
TCRBV9S1A1TA0A576 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TCRBV9S1A1TA0A576 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TCRBV9S1A1TA0A576 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.04■□□□□ 0.48
TCRBV9S1A1TA0A576 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TCRBV9S1A1TA0A576 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TCRBV9S1A1TA0A576 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TCRBV9S1A1TA0A576 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.04■□□□□ 0.48
TCRBV9S1A1TA0A576 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
TCRBV9S1A1TA0A576 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TCRBV9S1A1TA0A576 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TCRBV9S1A1TA0A576 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
TCRBV9S1A1TA0A576 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TCRBV9S1A1TA0A576 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TCRBV9S1A1TA0A576 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TCRBV9S1A1TA0A576 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TCRBV9S1A1TA0A576 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TCRBV9S1A1TA0A576 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
TCRBV9S1A1TA0A576 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
TCRBV9S1A1TA0A576 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.03■□□□□ 0.48
TCRBV9S1A1TA0A576 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
TCRBV9S1A1TA0A576 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TCRBV9S1A1TA0A576 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TCRBV9S1A1TA0A576 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.03■□□□□ 0.48
TCRBV9S1A1TA0A576 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TCRBV9S1A1TA0A576 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
TCRBV9S1A1TA0A576 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TCRBV9S1A1TA0A576 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TCRBV9S1A1TA0A576 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TCRBV9S1A1TA0A576 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TCRBV9S1A1TA0A576 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TCRBV9S1A1TA0A576 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.03■□□□□ 0.48
TCRBV9S1A1TA0A576 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.03■□□□□ 0.48
TCRBV9S1A1TA0A576 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
TCRBV9S1A1TA0A576 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.03■□□□□ 0.48
TCRBV9S1A1TA0A576 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
TCRBV9S1A1TA0A576 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.03■□□□□ 0.48
TCRBV9S1A1TA0A576 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.03■□□□□ 0.48
TCRBV9S1A1TA0A576 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TCRBV9S1A1TA0A576 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
TCRBV9S1A1TA0A576 AC010947.1-201ENST00000623454 693 ntBASIC18.03■□□□□ 0.48
TCRBV9S1A1TA0A576 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TCRBV9S1A1TA0A576 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TCRBV9S1A1TA0A576 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.03■□□□□ 0.48
TCRBV9S1A1TA0A576 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
TCRBV9S1A1TA0A576 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TCRBV9S1A1TA0A576 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TCRBV9S1A1TA0A576 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TCRBV9S1A1TA0A576 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
TCRBV9S1A1TA0A576 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TCRBV9S1A1TA0A576 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.03■□□□□ 0.48
TCRBV9S1A1TA0A576 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TCRBV9S1A1TA0A576 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms