Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TCRBV7S3A2A0A539 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TCRBV7S3A2A0A539 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.22■□□□□ 0.51
TCRBV7S3A2A0A539 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV7S3A2A0A539 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.22■□□□□ 0.51
TCRBV7S3A2A0A539 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV7S3A2A0A539 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV7S3A2A0A539 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.22■□□□□ 0.51
TCRBV7S3A2A0A539 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV7S3A2A0A539 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV7S3A2A0A539 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TCRBV7S3A2A0A539 AL138688.1-201ENST00000624851 1594 ntBASIC18.21■□□□□ 0.51
TCRBV7S3A2A0A539 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
TCRBV7S3A2A0A539 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.21■□□□□ 0.51
TCRBV7S3A2A0A539 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
TCRBV7S3A2A0A539 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TCRBV7S3A2A0A539 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
TCRBV7S3A2A0A539 SLC25A3P1-201ENST00000443844 931 ntBASIC18.21■□□□□ 0.51
TCRBV7S3A2A0A539 RASA4DP-201ENST00000460726 1199 ntBASIC18.21■□□□□ 0.51
TCRBV7S3A2A0A539 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.21■□□□□ 0.51
TCRBV7S3A2A0A539 AL441883.1-201ENST00000566170 1045 ntBASIC18.21■□□□□ 0.51
TCRBV7S3A2A0A539 AC008687.5-201ENST00000593746 558 ntBASIC18.21■□□□□ 0.51
TCRBV7S3A2A0A539 AC024563.2-201ENST00000603282 481 ntBASIC18.21■□□□□ 0.51
TCRBV7S3A2A0A539 AL391807.1-203ENST00000604392 2365 ntBASIC18.21■□□□□ 0.51
TCRBV7S3A2A0A539 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TCRBV7S3A2A0A539 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TCRBV7S3A2A0A539 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TCRBV7S3A2A0A539 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
TCRBV7S3A2A0A539 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TCRBV7S3A2A0A539 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TCRBV7S3A2A0A539 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.21■□□□□ 0.51
TCRBV7S3A2A0A539 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.21■□□□□ 0.5
TCRBV7S3A2A0A539 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TCRBV7S3A2A0A539 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TCRBV7S3A2A0A539 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.2■□□□□ 0.5
TCRBV7S3A2A0A539 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TCRBV7S3A2A0A539 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.2■□□□□ 0.5
TCRBV7S3A2A0A539 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TCRBV7S3A2A0A539 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TCRBV7S3A2A0A539 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TCRBV7S3A2A0A539 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TCRBV7S3A2A0A539 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.2■□□□□ 0.5
TCRBV7S3A2A0A539 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.2■□□□□ 0.5
TCRBV7S3A2A0A539 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TCRBV7S3A2A0A539 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TCRBV7S3A2A0A539 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TCRBV7S3A2A0A539 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.2■□□□□ 0.5
TCRBV7S3A2A0A539 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TCRBV7S3A2A0A539 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.2■□□□□ 0.5
TCRBV7S3A2A0A539 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.2■□□□□ 0.5
TCRBV7S3A2A0A539 AC066615.1-201ENST00000640911 628 ntBASIC18.2■□□□□ 0.5
TCRBV7S3A2A0A539 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TCRBV7S3A2A0A539 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TCRBV7S3A2A0A539 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.2■□□□□ 0.5
TCRBV7S3A2A0A539 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TCRBV7S3A2A0A539 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
TCRBV7S3A2A0A539 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.2■□□□□ 0.5
TCRBV7S3A2A0A539 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TCRBV7S3A2A0A539 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TCRBV7S3A2A0A539 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.2■□□□□ 0.5
TCRBV7S3A2A0A539 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TCRBV7S3A2A0A539 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TCRBV7S3A2A0A539 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.2■□□□□ 0.5
TCRBV7S3A2A0A539 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TCRBV7S3A2A0A539 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
TCRBV7S3A2A0A539 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TCRBV7S3A2A0A539 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.19■□□□□ 0.5
TCRBV7S3A2A0A539 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TCRBV7S3A2A0A539 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TCRBV7S3A2A0A539 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.19■□□□□ 0.5
TCRBV7S3A2A0A539 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
TCRBV7S3A2A0A539 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TCRBV7S3A2A0A539 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TCRBV7S3A2A0A539 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TCRBV7S3A2A0A539 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TCRBV7S3A2A0A539 SPDYE15P-201ENST00000424157 909 ntBASIC18.19■□□□□ 0.5
TCRBV7S3A2A0A539 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.19■□□□□ 0.5
TCRBV7S3A2A0A539 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
TCRBV7S3A2A0A539 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TCRBV7S3A2A0A539 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.19■□□□□ 0.5
TCRBV7S3A2A0A539 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.19■□□□□ 0.5
TCRBV7S3A2A0A539 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TCRBV7S3A2A0A539 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TCRBV7S3A2A0A539 HLA-J-201ENST00000462773 1622 ntBASIC18.19■□□□□ 0.5
TCRBV7S3A2A0A539 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TCRBV7S3A2A0A539 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TCRBV7S3A2A0A539 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TCRBV7S3A2A0A539 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.19■□□□□ 0.5
TCRBV7S3A2A0A539 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TCRBV7S3A2A0A539 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.18■□□□□ 0.5
TCRBV7S3A2A0A539 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TCRBV7S3A2A0A539 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TCRBV7S3A2A0A539 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TCRBV7S3A2A0A539 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TCRBV7S3A2A0A539 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
TCRBV7S3A2A0A539 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TCRBV7S3A2A0A539 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TCRBV7S3A2A0A539 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.18■□□□□ 0.5
TCRBV7S3A2A0A539 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.18■□□□□ 0.5
TCRBV7S3A2A0A539 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms