Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC22.65■■□□□ 1.22
LOC102724428A0A0B4J2F2 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC22.65■■□□□ 1.22
LOC102724428A0A0B4J2F2 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
LOC102724428A0A0B4J2F2 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC22.65■■□□□ 1.22
LOC102724428A0A0B4J2F2 POLD4-207ENST00000531239 584 ntTSL 2 BASIC22.65■■□□□ 1.22
LOC102724428A0A0B4J2F2 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LOC102724428A0A0B4J2F2 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
LOC102724428A0A0B4J2F2 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC22.65■■□□□ 1.22
LOC102724428A0A0B4J2F2 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC22.65■■□□□ 1.22
LOC102724428A0A0B4J2F2 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC22.65■■□□□ 1.22
LOC102724428A0A0B4J2F2 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LOC102724428A0A0B4J2F2 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC22.65■■□□□ 1.22
LOC102724428A0A0B4J2F2 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC22.65■■□□□ 1.22
LOC102724428A0A0B4J2F2 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC22.65■■□□□ 1.22
LOC102724428A0A0B4J2F2 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LOC102724428A0A0B4J2F2 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LOC102724428A0A0B4J2F2 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC22.65■■□□□ 1.22
LOC102724428A0A0B4J2F2 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC22.65■■□□□ 1.22
LOC102724428A0A0B4J2F2 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LOC102724428A0A0B4J2F2 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LOC102724428A0A0B4J2F2 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LOC102724428A0A0B4J2F2 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
LOC102724428A0A0B4J2F2 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC22.64■■□□□ 1.22
LOC102724428A0A0B4J2F2 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
LOC102724428A0A0B4J2F2 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
LOC102724428A0A0B4J2F2 AC003669.1-201ENST00000334569 611 ntBASIC22.64■■□□□ 1.21
LOC102724428A0A0B4J2F2 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
LOC102724428A0A0B4J2F2 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC22.64■■□□□ 1.21
LOC102724428A0A0B4J2F2 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
LOC102724428A0A0B4J2F2 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
LOC102724428A0A0B4J2F2 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC22.64■■□□□ 1.21
LOC102724428A0A0B4J2F2 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC22.64■■□□□ 1.21
LOC102724428A0A0B4J2F2 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
LOC102724428A0A0B4J2F2 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC22.64■■□□□ 1.21
LOC102724428A0A0B4J2F2 AC096734.2-201ENST00000562054 433 ntBASIC22.64■■□□□ 1.21
LOC102724428A0A0B4J2F2 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC22.64■■□□□ 1.21
LOC102724428A0A0B4J2F2 AC092364.2-202ENST00000597012 1073 ntBASIC22.64■■□□□ 1.21
LOC102724428A0A0B4J2F2 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC22.64■■□□□ 1.21
LOC102724428A0A0B4J2F2 AC019129.2-201ENST00000609837 1235 ntBASIC22.64■■□□□ 1.21
LOC102724428A0A0B4J2F2 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
LOC102724428A0A0B4J2F2 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC22.64■■□□□ 1.21
LOC102724428A0A0B4J2F2 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
LOC102724428A0A0B4J2F2 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
LOC102724428A0A0B4J2F2 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
LOC102724428A0A0B4J2F2 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
LOC102724428A0A0B4J2F2 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
LOC102724428A0A0B4J2F2 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
LOC102724428A0A0B4J2F2 SP100-208ENST00000427101 1922 ntTSL 2 BASIC22.63■■□□□ 1.21
LOC102724428A0A0B4J2F2 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
LOC102724428A0A0B4J2F2 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
LOC102724428A0A0B4J2F2 MIR770-201ENST00000390219 98 ntBASIC22.63■■□□□ 1.21
LOC102724428A0A0B4J2F2 MRPL20P1-201ENST00000400819 433 ntBASIC22.63■■□□□ 1.21
LOC102724428A0A0B4J2F2 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC22.63■■□□□ 1.21
LOC102724428A0A0B4J2F2 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
LOC102724428A0A0B4J2F2 KRT19P2-202ENST00000557173 1012 ntBASIC22.63■■□□□ 1.21
LOC102724428A0A0B4J2F2 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC22.63■■□□□ 1.21
LOC102724428A0A0B4J2F2 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC22.63■■□□□ 1.21
LOC102724428A0A0B4J2F2 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC22.63■■□□□ 1.21
LOC102724428A0A0B4J2F2 METTL23-205ENST00000588302 925 ntTSL 5 BASIC22.63■■□□□ 1.21
LOC102724428A0A0B4J2F2 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC22.63■■□□□ 1.21
LOC102724428A0A0B4J2F2 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC22.63■■□□□ 1.21
LOC102724428A0A0B4J2F2 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
LOC102724428A0A0B4J2F2 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
LOC102724428A0A0B4J2F2 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
LOC102724428A0A0B4J2F2 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
LOC102724428A0A0B4J2F2 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC22.63■■□□□ 1.21
LOC102724428A0A0B4J2F2 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
LOC102724428A0A0B4J2F2 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
LOC102724428A0A0B4J2F2 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
LOC102724428A0A0B4J2F2 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
LOC102724428A0A0B4J2F2 PC-214ENST00000628663 1470 ntTSL 5 BASIC22.62■■□□□ 1.21
LOC102724428A0A0B4J2F2 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC22.62■■□□□ 1.21
LOC102724428A0A0B4J2F2 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
LOC102724428A0A0B4J2F2 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
LOC102724428A0A0B4J2F2 SYS1-203ENST00000414310 795 ntTSL 3 BASIC22.62■■□□□ 1.21
LOC102724428A0A0B4J2F2 CD63-210ENST00000550776 870 ntTSL 5 BASIC22.62■■□□□ 1.21
LOC102724428A0A0B4J2F2 OR7E47P-204ENST00000575924 449 ntBASIC22.62■■□□□ 1.21
LOC102724428A0A0B4J2F2 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC22.62■■□□□ 1.21
LOC102724428A0A0B4J2F2 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC22.62■■□□□ 1.21
LOC102724428A0A0B4J2F2 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
LOC102724428A0A0B4J2F2 AQP6-205ENST00000618286 829 ntTSL 5 BASIC22.62■■□□□ 1.21
LOC102724428A0A0B4J2F2 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC22.62■■□□□ 1.21
LOC102724428A0A0B4J2F2 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
LOC102724428A0A0B4J2F2 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
LOC102724428A0A0B4J2F2 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
LOC102724428A0A0B4J2F2 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
LOC102724428A0A0B4J2F2 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
LOC102724428A0A0B4J2F2 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
LOC102724428A0A0B4J2F2 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC22.62■■□□□ 1.21
LOC102724428A0A0B4J2F2 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC22.62■■□□□ 1.21
LOC102724428A0A0B4J2F2 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC22.62■■□□□ 1.21
LOC102724428A0A0B4J2F2 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
LOC102724428A0A0B4J2F2 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
LOC102724428A0A0B4J2F2 BCAR1-209ENST00000546196 1340 ntBASIC22.61■■□□□ 1.21
LOC102724428A0A0B4J2F2 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
LOC102724428A0A0B4J2F2 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
LOC102724428A0A0B4J2F2 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
LOC102724428A0A0B4J2F2 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
LOC102724428A0A0B4J2F2 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC22.61■■□□□ 1.21
LOC102724428A0A0B4J2F2 CALY-203ENST00000368558 825 ntTSL 5 BASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms