Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV9-2A0A087WT02 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV9-2A0A087WT02 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC13.4□□□□□ -0.26
TRAV9-2A0A087WT02 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV9-2A0A087WT02 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV9-2A0A087WT02 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAV9-2A0A087WT02 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
TRAV9-2A0A087WT02 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
TRAV9-2A0A087WT02 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC13.4□□□□□ -0.26
TRAV9-2A0A087WT02 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV9-2A0A087WT02 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV9-2A0A087WT02 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV9-2A0A087WT02 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAV9-2A0A087WT02 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.4□□□□□ -0.26
TRAV9-2A0A087WT02 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV9-2A0A087WT02 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV9-2A0A087WT02 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV9-2A0A087WT02 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV9-2A0A087WT02 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
TRAV9-2A0A087WT02 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
TRAV9-2A0A087WT02 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV9-2A0A087WT02 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV9-2A0A087WT02 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.4□□□□□ -0.26
TRAV9-2A0A087WT02 LINC02199-201ENST00000506655 2702 ntBASIC13.4□□□□□ -0.26
TRAV9-2A0A087WT02 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV9-2A0A087WT02 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV9-2A0A087WT02 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC13.4□□□□□ -0.26
TRAV9-2A0A087WT02 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
TRAV9-2A0A087WT02 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
TRAV9-2A0A087WT02 RPS2P4-201ENST00000476944 856 ntBASIC13.4□□□□□ -0.26
TRAV9-2A0A087WT02 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV9-2A0A087WT02 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
TRAV9-2A0A087WT02 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC13.4□□□□□ -0.26
TRAV9-2A0A087WT02 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAV9-2A0A087WT02 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC13.4□□□□□ -0.26
TRAV9-2A0A087WT02 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV9-2A0A087WT02 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAV9-2A0A087WT02 KLF2-202ENST00000592003 564 ntTSL 3 BASIC13.4□□□□□ -0.26
TRAV9-2A0A087WT02 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
TRAV9-2A0A087WT02 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAV9-2A0A087WT02 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC13.4□□□□□ -0.26
TRAV9-2A0A087WT02 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV9-2A0A087WT02 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV9-2A0A087WT02 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAV9-2A0A087WT02 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC13.4□□□□□ -0.26
TRAV9-2A0A087WT02 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV9-2A0A087WT02 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV9-2A0A087WT02 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC13.4□□□□□ -0.26
TRAV9-2A0A087WT02 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV9-2A0A087WT02 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV9-2A0A087WT02 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.4□□□□□ -0.26
TRAV9-2A0A087WT02 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV9-2A0A087WT02 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV9-2A0A087WT02 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
TRAV9-2A0A087WT02 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.4□□□□□ -0.27
TRAV9-2A0A087WT02 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 DET1-205ENST00000558413 583 ntTSL 4 BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 AC233263.1-201ENST00000578059 224 ntBASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 AC066615.1-201ENST00000640911 628 ntBASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 AC116351.2-201ENST00000606540 1585 ntBASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 FLYWCH1P1-201ENST00000460917 1874 ntBASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 AC005052.1-201ENST00000625181 2492 ntBASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV9-2A0A087WT02 FUK-207ENST00000571514 3054 ntTSL 2 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms