Protein–RNA interactions for Protein: Q9Y6Q9

NCOA3, Nuclear receptor coactivator 3, humanhuman

Predictions only

Length 1,424 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA3Q9Y6Q9 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
NCOA3Q9Y6Q9 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
NCOA3Q9Y6Q9 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
NCOA3Q9Y6Q9 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
NCOA3Q9Y6Q9 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
NCOA3Q9Y6Q9 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC24.67■■□□□ 1.54
NCOA3Q9Y6Q9 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
NCOA3Q9Y6Q9 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC24.67■■□□□ 1.54
NCOA3Q9Y6Q9 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC24.67■■□□□ 1.54
NCOA3Q9Y6Q9 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC24.67■■□□□ 1.54
NCOA3Q9Y6Q9 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC24.67■■□□□ 1.54
NCOA3Q9Y6Q9 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC24.67■■□□□ 1.54
NCOA3Q9Y6Q9 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
NCOA3Q9Y6Q9 AC063926.2-201ENST00000623766 1308 ntBASIC24.67■■□□□ 1.54
NCOA3Q9Y6Q9 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
NCOA3Q9Y6Q9 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
NCOA3Q9Y6Q9 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC24.67■■□□□ 1.54
NCOA3Q9Y6Q9 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
NCOA3Q9Y6Q9 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
NCOA3Q9Y6Q9 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC24.66■■□□□ 1.54
NCOA3Q9Y6Q9 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
NCOA3Q9Y6Q9 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
NCOA3Q9Y6Q9 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
NCOA3Q9Y6Q9 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC24.66■■□□□ 1.54
NCOA3Q9Y6Q9 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
NCOA3Q9Y6Q9 AC003669.1-201ENST00000334569 611 ntBASIC24.66■■□□□ 1.54
NCOA3Q9Y6Q9 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC24.66■■□□□ 1.54
NCOA3Q9Y6Q9 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
NCOA3Q9Y6Q9 PMS2P4-201ENST00000412466 1052 ntBASIC24.66■■□□□ 1.54
NCOA3Q9Y6Q9 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC24.66■■□□□ 1.54
NCOA3Q9Y6Q9 AC067863.1-201ENST00000494933 530 ntBASIC24.66■■□□□ 1.54
NCOA3Q9Y6Q9 RNA5SP421-201ENST00000516864 134 ntBASIC24.66■■□□□ 1.54
NCOA3Q9Y6Q9 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC24.66■■□□□ 1.54
NCOA3Q9Y6Q9 AC023141.13-201ENST00000604991 943 ntBASIC24.66■■□□□ 1.54
NCOA3Q9Y6Q9 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC24.66■■□□□ 1.54
NCOA3Q9Y6Q9 AC009093.7-201ENST00000623853 1223 ntBASIC24.66■■□□□ 1.54
NCOA3Q9Y6Q9 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
NCOA3Q9Y6Q9 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
NCOA3Q9Y6Q9 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
NCOA3Q9Y6Q9 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
NCOA3Q9Y6Q9 AC025580.3-201ENST00000617932 1424 ntBASIC24.66■■□□□ 1.54
NCOA3Q9Y6Q9 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
NCOA3Q9Y6Q9 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
NCOA3Q9Y6Q9 AL049757.1-201ENST00000616842 1596 ntBASIC24.66■■□□□ 1.54
NCOA3Q9Y6Q9 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
NCOA3Q9Y6Q9 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC24.65■■□□□ 1.54
NCOA3Q9Y6Q9 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC24.65■■□□□ 1.54
NCOA3Q9Y6Q9 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC24.65■■□□□ 1.54
NCOA3Q9Y6Q9 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC24.65■■□□□ 1.54
NCOA3Q9Y6Q9 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC24.65■■□□□ 1.54
NCOA3Q9Y6Q9 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
NCOA3Q9Y6Q9 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC24.65■■□□□ 1.54
NCOA3Q9Y6Q9 FAM86GP-201ENST00000448322 971 ntBASIC24.65■■□□□ 1.54
NCOA3Q9Y6Q9 CCDC74BP1-201ENST00000508880 1123 ntBASIC24.65■■□□□ 1.54
NCOA3Q9Y6Q9 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC24.65■■□□□ 1.54
NCOA3Q9Y6Q9 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC24.65■■□□□ 1.54
NCOA3Q9Y6Q9 AC068137.2-201ENST00000605408 478 ntBASIC24.65■■□□□ 1.54
NCOA3Q9Y6Q9 LINC00628-201ENST00000628516 1289 ntBASIC24.65■■□□□ 1.54
NCOA3Q9Y6Q9 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
NCOA3Q9Y6Q9 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC24.65■■□□□ 1.54
NCOA3Q9Y6Q9 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
NCOA3Q9Y6Q9 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
NCOA3Q9Y6Q9 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
NCOA3Q9Y6Q9 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
NCOA3Q9Y6Q9 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
NCOA3Q9Y6Q9 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
NCOA3Q9Y6Q9 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
NCOA3Q9Y6Q9 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.54
NCOA3Q9Y6Q9 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC24.64■■□□□ 1.54
NCOA3Q9Y6Q9 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
NCOA3Q9Y6Q9 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
NCOA3Q9Y6Q9 KLF4P1-201ENST00000412782 1185 ntBASIC24.64■■□□□ 1.54
NCOA3Q9Y6Q9 AC015922.1-201ENST00000421102 1152 ntBASIC24.64■■□□□ 1.54
NCOA3Q9Y6Q9 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC24.64■■□□□ 1.54
NCOA3Q9Y6Q9 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
NCOA3Q9Y6Q9 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC24.64■■□□□ 1.54
NCOA3Q9Y6Q9 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC24.64■■□□□ 1.54
NCOA3Q9Y6Q9 AC087641.1-201ENST00000557561 1021 ntBASIC24.64■■□□□ 1.54
NCOA3Q9Y6Q9 AC099343.3-201ENST00000605834 2503 ntBASIC24.64■■□□□ 1.54
NCOA3Q9Y6Q9 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
NCOA3Q9Y6Q9 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
NCOA3Q9Y6Q9 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
NCOA3Q9Y6Q9 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
NCOA3Q9Y6Q9 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
NCOA3Q9Y6Q9 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
NCOA3Q9Y6Q9 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
NCOA3Q9Y6Q9 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
NCOA3Q9Y6Q9 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
NCOA3Q9Y6Q9 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
NCOA3Q9Y6Q9 NKTR-203ENST00000442970 646 ntTSL 2 BASIC24.63■■□□□ 1.53
NCOA3Q9Y6Q9 SIGLEC30P-201ENST00000455569 941 ntBASIC24.63■■□□□ 1.53
NCOA3Q9Y6Q9 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC24.63■■□□□ 1.53
NCOA3Q9Y6Q9 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC24.63■■□□□ 1.53
NCOA3Q9Y6Q9 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC24.63■■□□□ 1.53
NCOA3Q9Y6Q9 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
NCOA3Q9Y6Q9 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
NCOA3Q9Y6Q9 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
NCOA3Q9Y6Q9 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
NCOA3Q9Y6Q9 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
NCOA3Q9Y6Q9 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms