Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.27■□□□□ 0.35
AP4B1Q9Y6B7 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.26■□□□□ 0.35
AP4B1Q9Y6B7 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.26■□□□□ 0.35
AP4B1Q9Y6B7 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP4B1Q9Y6B7 AC008556.1-201ENST00000610908 2040 ntBASIC17.26■□□□□ 0.35
AP4B1Q9Y6B7 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.26■□□□□ 0.35
AP4B1Q9Y6B7 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.26■□□□□ 0.35
AP4B1Q9Y6B7 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP4B1Q9Y6B7 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.26■□□□□ 0.35
AP4B1Q9Y6B7 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP4B1Q9Y6B7 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.26■□□□□ 0.35
AP4B1Q9Y6B7 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP4B1Q9Y6B7 AC087499.1-201ENST00000418141 1075 ntBASIC17.26■□□□□ 0.35
AP4B1Q9Y6B7 MFAP1P1-201ENST00000442257 1255 ntBASIC17.26■□□□□ 0.35
AP4B1Q9Y6B7 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.26■□□□□ 0.35
AP4B1Q9Y6B7 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.26■□□□□ 0.35
AP4B1Q9Y6B7 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP4B1Q9Y6B7 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.26■□□□□ 0.35
AP4B1Q9Y6B7 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.26■□□□□ 0.35
AP4B1Q9Y6B7 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP4B1Q9Y6B7 AC006116.8-202ENST00000587620 1550 ntBASIC17.26■□□□□ 0.35
AP4B1Q9Y6B7 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.26■□□□□ 0.35
AP4B1Q9Y6B7 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
AP4B1Q9Y6B7 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
AP4B1Q9Y6B7 AL162727.3-201ENST00000635661 2787 ntBASIC17.26■□□□□ 0.35
AP4B1Q9Y6B7 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.26■□□□□ 0.35
AP4B1Q9Y6B7 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.26■□□□□ 0.35
AP4B1Q9Y6B7 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
AP4B1Q9Y6B7 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.26■□□□□ 0.35
AP4B1Q9Y6B7 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.26■□□□□ 0.35
AP4B1Q9Y6B7 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP4B1Q9Y6B7 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP4B1Q9Y6B7 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP4B1Q9Y6B7 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP4B1Q9Y6B7 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP4B1Q9Y6B7 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.25■□□□□ 0.35
AP4B1Q9Y6B7 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.25■□□□□ 0.35
AP4B1Q9Y6B7 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
AP4B1Q9Y6B7 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.25■□□□□ 0.35
AP4B1Q9Y6B7 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.25■□□□□ 0.35
AP4B1Q9Y6B7 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP4B1Q9Y6B7 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
AP4B1Q9Y6B7 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP4B1Q9Y6B7 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
AP4B1Q9Y6B7 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP4B1Q9Y6B7 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP4B1Q9Y6B7 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.25■□□□□ 0.35
AP4B1Q9Y6B7 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP4B1Q9Y6B7 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.25■□□□□ 0.35
AP4B1Q9Y6B7 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.25■□□□□ 0.35
AP4B1Q9Y6B7 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.25■□□□□ 0.35
AP4B1Q9Y6B7 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
AP4B1Q9Y6B7 CKBP1-201ENST00000565489 1086 ntBASIC17.25■□□□□ 0.35
AP4B1Q9Y6B7 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.25■□□□□ 0.35
AP4B1Q9Y6B7 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.25■□□□□ 0.35
AP4B1Q9Y6B7 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
AP4B1Q9Y6B7 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.25■□□□□ 0.35
AP4B1Q9Y6B7 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.25■□□□□ 0.35
AP4B1Q9Y6B7 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
AP4B1Q9Y6B7 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP4B1Q9Y6B7 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP4B1Q9Y6B7 PCDH8P1-201ENST00000428983 2773 ntBASIC17.25■□□□□ 0.35
AP4B1Q9Y6B7 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP4B1Q9Y6B7 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.25■□□□□ 0.35
AP4B1Q9Y6B7 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
AP4B1Q9Y6B7 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
AP4B1Q9Y6B7 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP4B1Q9Y6B7 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
AP4B1Q9Y6B7 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP4B1Q9Y6B7 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP4B1Q9Y6B7 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.25■□□□□ 0.35
AP4B1Q9Y6B7 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.25■□□□□ 0.35
AP4B1Q9Y6B7 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP4B1Q9Y6B7 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.24■□□□□ 0.35
AP4B1Q9Y6B7 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
AP4B1Q9Y6B7 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.24■□□□□ 0.35
AP4B1Q9Y6B7 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
AP4B1Q9Y6B7 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
AP4B1Q9Y6B7 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP4B1Q9Y6B7 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP4B1Q9Y6B7 AC112777.1-201ENST00000540175 1423 ntBASIC17.24■□□□□ 0.35
AP4B1Q9Y6B7 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.24■□□□□ 0.35
AP4B1Q9Y6B7 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP4B1Q9Y6B7 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.24■□□□□ 0.35
AP4B1Q9Y6B7 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
AP4B1Q9Y6B7 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
AP4B1Q9Y6B7 AL391005.1-201ENST00000623953 2435 ntBASIC17.24■□□□□ 0.35
AP4B1Q9Y6B7 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.24■□□□□ 0.35
AP4B1Q9Y6B7 AL390955.1-201ENST00000428694 934 ntBASIC17.24■□□□□ 0.35
AP4B1Q9Y6B7 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.24■□□□□ 0.35
AP4B1Q9Y6B7 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
AP4B1Q9Y6B7 NAPSB-206ENST00000562112 1266 ntBASIC17.24■□□□□ 0.35
AP4B1Q9Y6B7 C2orf69P3-201ENST00000565542 1120 ntBASIC17.24■□□□□ 0.35
AP4B1Q9Y6B7 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.24■□□□□ 0.35
AP4B1Q9Y6B7 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
AP4B1Q9Y6B7 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP4B1Q9Y6B7 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP4B1Q9Y6B7 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP4B1Q9Y6B7 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
AP4B1Q9Y6B7 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms