Protein–RNA interactions for Protein: Q9Y5U2

TSSC4, Protein TSSC4, humanhuman

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4Q9Y5U2 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TSSC4Q9Y5U2 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TSSC4Q9Y5U2 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
TSSC4Q9Y5U2 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TSSC4Q9Y5U2 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TSSC4Q9Y5U2 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TSSC4Q9Y5U2 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TSSC4Q9Y5U2 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TSSC4Q9Y5U2 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TSSC4Q9Y5U2 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
TSSC4Q9Y5U2 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TSSC4Q9Y5U2 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TSSC4Q9Y5U2 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TSSC4Q9Y5U2 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC14.05□□□□□ -0.16
TSSC4Q9Y5U2 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TSSC4Q9Y5U2 SAPCD2P3-201ENST00000455031 850 ntBASIC14.05□□□□□ -0.16
TSSC4Q9Y5U2 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC14.05□□□□□ -0.16
TSSC4Q9Y5U2 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.05□□□□□ -0.16
TSSC4Q9Y5U2 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.05□□□□□ -0.16
TSSC4Q9Y5U2 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.05□□□□□ -0.16
TSSC4Q9Y5U2 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TSSC4Q9Y5U2 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC14.05□□□□□ -0.16
TSSC4Q9Y5U2 AL121912.1-201ENST00000603683 238 ntBASIC14.05□□□□□ -0.16
TSSC4Q9Y5U2 AC009154.2-201ENST00000621177 724 ntBASIC14.05□□□□□ -0.16
TSSC4Q9Y5U2 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
TSSC4Q9Y5U2 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TSSC4Q9Y5U2 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TSSC4Q9Y5U2 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
TSSC4Q9Y5U2 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC14.05□□□□□ -0.16
TSSC4Q9Y5U2 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TSSC4Q9Y5U2 AL024508.2-201ENST00000607749 1894 ntBASIC14.05□□□□□ -0.16
TSSC4Q9Y5U2 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TSSC4Q9Y5U2 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TSSC4Q9Y5U2 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TSSC4Q9Y5U2 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.05□□□□□ -0.16
TSSC4Q9Y5U2 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TSSC4Q9Y5U2 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TSSC4Q9Y5U2 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
TSSC4Q9Y5U2 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TSSC4Q9Y5U2 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC14.05□□□□□ -0.16
TSSC4Q9Y5U2 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TSSC4Q9Y5U2 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.05□□□□□ -0.16
TSSC4Q9Y5U2 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC14.05□□□□□ -0.16
TSSC4Q9Y5U2 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14.05□□□□□ -0.16
TSSC4Q9Y5U2 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
TSSC4Q9Y5U2 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TSSC4Q9Y5U2 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TSSC4Q9Y5U2 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC14.05□□□□□ -0.16
TSSC4Q9Y5U2 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TSSC4Q9Y5U2 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TSSC4Q9Y5U2 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TSSC4Q9Y5U2 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TSSC4Q9Y5U2 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC14.04□□□□□ -0.16
TSSC4Q9Y5U2 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC14.04□□□□□ -0.16
TSSC4Q9Y5U2 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.04□□□□□ -0.16
TSSC4Q9Y5U2 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TSSC4Q9Y5U2 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TSSC4Q9Y5U2 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TSSC4Q9Y5U2 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TSSC4Q9Y5U2 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TSSC4Q9Y5U2 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TSSC4Q9Y5U2 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TSSC4Q9Y5U2 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TSSC4Q9Y5U2 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TSSC4Q9Y5U2 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TSSC4Q9Y5U2 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.04□□□□□ -0.16
TSSC4Q9Y5U2 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.04□□□□□ -0.16
TSSC4Q9Y5U2 AC096582.2-201ENST00000510860 516 ntBASIC14.04□□□□□ -0.16
TSSC4Q9Y5U2 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
TSSC4Q9Y5U2 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TSSC4Q9Y5U2 AL662844.1-201ENST00000546340 181 ntBASIC14.04□□□□□ -0.16
TSSC4Q9Y5U2 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC14.04□□□□□ -0.16
TSSC4Q9Y5U2 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TSSC4Q9Y5U2 AL591684.3-201ENST00000605187 298 ntBASIC14.04□□□□□ -0.16
TSSC4Q9Y5U2 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.04□□□□□ -0.16
TSSC4Q9Y5U2 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TSSC4Q9Y5U2 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TSSC4Q9Y5U2 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TSSC4Q9Y5U2 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
TSSC4Q9Y5U2 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TSSC4Q9Y5U2 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TSSC4Q9Y5U2 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TSSC4Q9Y5U2 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TSSC4Q9Y5U2 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
TSSC4Q9Y5U2 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TSSC4Q9Y5U2 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC14.04□□□□□ -0.16
TSSC4Q9Y5U2 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TSSC4Q9Y5U2 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
TSSC4Q9Y5U2 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TSSC4Q9Y5U2 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TSSC4Q9Y5U2 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TSSC4Q9Y5U2 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TSSC4Q9Y5U2 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TSSC4Q9Y5U2 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TSSC4Q9Y5U2 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC14.03□□□□□ -0.16
TSSC4Q9Y5U2 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TSSC4Q9Y5U2 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TSSC4Q9Y5U2 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TSSC4Q9Y5U2 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TSSC4Q9Y5U2 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms