Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
PCDHB11Q9Y5F2 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHB11Q9Y5F2 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHB11Q9Y5F2 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHB11Q9Y5F2 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHB11Q9Y5F2 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHB11Q9Y5F2 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.58■□□□□ 0.4
PCDHB11Q9Y5F2 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHB11Q9Y5F2 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHB11Q9Y5F2 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.58■□□□□ 0.4
PCDHB11Q9Y5F2 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.58■□□□□ 0.4
PCDHB11Q9Y5F2 KRT18P31-201ENST00000506277 1292 ntBASIC17.58■□□□□ 0.4
PCDHB11Q9Y5F2 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.58■□□□□ 0.4
PCDHB11Q9Y5F2 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.58■□□□□ 0.4
PCDHB11Q9Y5F2 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.58■□□□□ 0.4
PCDHB11Q9Y5F2 GPR32P1-201ENST00000601788 811 ntBASIC17.58■□□□□ 0.4
PCDHB11Q9Y5F2 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.58■□□□□ 0.4
PCDHB11Q9Y5F2 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHB11Q9Y5F2 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.58■□□□□ 0.4
PCDHB11Q9Y5F2 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
PCDHB11Q9Y5F2 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.58■□□□□ 0.4
PCDHB11Q9Y5F2 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.58■□□□□ 0.4
PCDHB11Q9Y5F2 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHB11Q9Y5F2 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHB11Q9Y5F2 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHB11Q9Y5F2 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHB11Q9Y5F2 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHB11Q9Y5F2 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHB11Q9Y5F2 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.57■□□□□ 0.4
PCDHB11Q9Y5F2 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHB11Q9Y5F2 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDHB11Q9Y5F2 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHB11Q9Y5F2 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHB11Q9Y5F2 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHB11Q9Y5F2 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PCDHB11Q9Y5F2 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHB11Q9Y5F2 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
PCDHB11Q9Y5F2 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHB11Q9Y5F2 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDHB11Q9Y5F2 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDHB11Q9Y5F2 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
PCDHB11Q9Y5F2 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHB11Q9Y5F2 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
PCDHB11Q9Y5F2 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHB11Q9Y5F2 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHB11Q9Y5F2 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDHB11Q9Y5F2 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDHB11Q9Y5F2 AC113404.2-201ENST00000507884 177 ntBASIC17.57■□□□□ 0.4
PCDHB11Q9Y5F2 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.57■□□□□ 0.4
PCDHB11Q9Y5F2 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.57■□□□□ 0.4
PCDHB11Q9Y5F2 AL031008.1-201ENST00000619963 541 ntBASIC17.57■□□□□ 0.4
PCDHB11Q9Y5F2 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.57■□□□□ 0.4
PCDHB11Q9Y5F2 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHB11Q9Y5F2 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PCDHB11Q9Y5F2 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHB11Q9Y5F2 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHB11Q9Y5F2 AC135776.1-201ENST00000319817 2481 ntBASIC17.57■□□□□ 0.4
PCDHB11Q9Y5F2 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHB11Q9Y5F2 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
PCDHB11Q9Y5F2 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PCDHB11Q9Y5F2 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHB11Q9Y5F2 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PCDHB11Q9Y5F2 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
PCDHB11Q9Y5F2 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHB11Q9Y5F2 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
PCDHB11Q9Y5F2 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHB11Q9Y5F2 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHB11Q9Y5F2 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHB11Q9Y5F2 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHB11Q9Y5F2 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHB11Q9Y5F2 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHB11Q9Y5F2 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHB11Q9Y5F2 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
PCDHB11Q9Y5F2 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.56■□□□□ 0.4
PCDHB11Q9Y5F2 AL662844.1-201ENST00000546340 181 ntBASIC17.56■□□□□ 0.4
PCDHB11Q9Y5F2 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHB11Q9Y5F2 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
PCDHB11Q9Y5F2 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.56■□□□□ 0.4
PCDHB11Q9Y5F2 Z69720.1-201ENST00000601483 472 ntBASIC17.56■□□□□ 0.4
PCDHB11Q9Y5F2 AL390719.2-201ENST00000606993 987 ntBASIC17.56■□□□□ 0.4
PCDHB11Q9Y5F2 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDHB11Q9Y5F2 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDHB11Q9Y5F2 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHB11Q9Y5F2 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHB11Q9Y5F2 AC093677.2-201ENST00000600169 1863 ntBASIC17.56■□□□□ 0.4
PCDHB11Q9Y5F2 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHB11Q9Y5F2 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHB11Q9Y5F2 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
PCDHB11Q9Y5F2 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PCDHB11Q9Y5F2 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHB11Q9Y5F2 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHB11Q9Y5F2 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHB11Q9Y5F2 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHB11Q9Y5F2 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHB11Q9Y5F2 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB11Q9Y5F2 PCDHB18P-201ENST00000524813 2368 ntBASIC17.55■□□□□ 0.4
PCDHB11Q9Y5F2 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB11Q9Y5F2 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHB11Q9Y5F2 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB11Q9Y5F2 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms