Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
FOXA2Q9Y261 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
FOXA2Q9Y261 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC14.54□□□□□ -0.08
FOXA2Q9Y261 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
FOXA2Q9Y261 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
FOXA2Q9Y261 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
FOXA2Q9Y261 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
FOXA2Q9Y261 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
FOXA2Q9Y261 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FOXA2Q9Y261 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
FOXA2Q9Y261 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FOXA2Q9Y261 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
FOXA2Q9Y261 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FOXA2Q9Y261 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
FOXA2Q9Y261 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
FOXA2Q9Y261 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
FOXA2Q9Y261 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FOXA2Q9Y261 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FOXA2Q9Y261 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
FOXA2Q9Y261 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
FOXA2Q9Y261 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
FOXA2Q9Y261 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
FOXA2Q9Y261 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
FOXA2Q9Y261 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
FOXA2Q9Y261 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC14.53□□□□□ -0.08
FOXA2Q9Y261 YBX1P2-201ENST00000489612 999 ntBASIC14.53□□□□□ -0.08
FOXA2Q9Y261 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC14.53□□□□□ -0.08
FOXA2Q9Y261 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC14.53□□□□□ -0.08
FOXA2Q9Y261 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC14.53□□□□□ -0.08
FOXA2Q9Y261 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC14.53□□□□□ -0.08
FOXA2Q9Y261 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC14.53□□□□□ -0.08
FOXA2Q9Y261 AC139887.4-201ENST00000607877 719 ntBASIC14.53□□□□□ -0.08
FOXA2Q9Y261 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC14.53□□□□□ -0.08
FOXA2Q9Y261 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC14.53□□□□□ -0.08
FOXA2Q9Y261 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
FOXA2Q9Y261 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
FOXA2Q9Y261 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
FOXA2Q9Y261 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
FOXA2Q9Y261 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
FOXA2Q9Y261 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FOXA2Q9Y261 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
FOXA2Q9Y261 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
FOXA2Q9Y261 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
FOXA2Q9Y261 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC14.52□□□□□ -0.08
FOXA2Q9Y261 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
FOXA2Q9Y261 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
FOXA2Q9Y261 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
FOXA2Q9Y261 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC14.52□□□□□ -0.08
FOXA2Q9Y261 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.52□□□□□ -0.08
FOXA2Q9Y261 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
FOXA2Q9Y261 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
FOXA2Q9Y261 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
FOXA2Q9Y261 AK4P3-201ENST00000418260 669 ntBASIC14.52□□□□□ -0.09
FOXA2Q9Y261 FAM210CP-201ENST00000445714 574 ntBASIC14.52□□□□□ -0.09
FOXA2Q9Y261 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC14.52□□□□□ -0.09
FOXA2Q9Y261 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC14.52□□□□□ -0.09
FOXA2Q9Y261 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
FOXA2Q9Y261 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC14.52□□□□□ -0.09
FOXA2Q9Y261 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC14.52□□□□□ -0.09
FOXA2Q9Y261 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
FOXA2Q9Y261 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
FOXA2Q9Y261 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
FOXA2Q9Y261 AC010240.3-201ENST00000607688 395 ntBASIC14.52□□□□□ -0.09
FOXA2Q9Y261 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
FOXA2Q9Y261 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
FOXA2Q9Y261 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
FOXA2Q9Y261 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
FOXA2Q9Y261 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
FOXA2Q9Y261 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
FOXA2Q9Y261 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.52□□□□□ -0.09
FOXA2Q9Y261 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
FOXA2Q9Y261 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
FOXA2Q9Y261 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
FOXA2Q9Y261 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
FOXA2Q9Y261 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
FOXA2Q9Y261 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
FOXA2Q9Y261 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
FOXA2Q9Y261 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC14.51□□□□□ -0.09
FOXA2Q9Y261 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
FOXA2Q9Y261 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
FOXA2Q9Y261 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
FOXA2Q9Y261 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
FOXA2Q9Y261 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
FOXA2Q9Y261 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
FOXA2Q9Y261 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
FOXA2Q9Y261 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
FOXA2Q9Y261 RNF152P1-201ENST00000397754 604 ntBASIC14.51□□□□□ -0.09
FOXA2Q9Y261 AC117947.1-201ENST00000427448 529 ntBASIC14.51□□□□□ -0.09
FOXA2Q9Y261 AC092647.4-201ENST00000457211 535 ntBASIC14.51□□□□□ -0.09
FOXA2Q9Y261 SEC1P-202ENST00000473944 940 ntBASIC14.51□□□□□ -0.09
FOXA2Q9Y261 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
FOXA2Q9Y261 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC14.51□□□□□ -0.09
FOXA2Q9Y261 ETFA-216ENST00000560726 942 ntTSL 3 BASIC14.51□□□□□ -0.09
FOXA2Q9Y261 GCSHP2-201ENST00000560971 527 ntBASIC14.51□□□□□ -0.09
FOXA2Q9Y261 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC14.51□□□□□ -0.09
FOXA2Q9Y261 AC008687.5-201ENST00000593746 558 ntBASIC14.51□□□□□ -0.09
FOXA2Q9Y261 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC14.51□□□□□ -0.09
FOXA2Q9Y261 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
FOXA2Q9Y261 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC14.51□□□□□ -0.09
FOXA2Q9Y261 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms