Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 KRT126P-201ENST00000549467 1181 ntBASIC16.92■□□□□ 0.3
RNF6Q9Y252 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.92■□□□□ 0.3
RNF6Q9Y252 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
RNF6Q9Y252 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.92■□□□□ 0.3
RNF6Q9Y252 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.92■□□□□ 0.3
RNF6Q9Y252 AC116407.4-201ENST00000623319 1061 ntBASIC16.92■□□□□ 0.3
RNF6Q9Y252 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RNF6Q9Y252 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF6Q9Y252 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.92■□□□□ 0.3
RNF6Q9Y252 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.92■□□□□ 0.3
RNF6Q9Y252 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF6Q9Y252 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RNF6Q9Y252 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF6Q9Y252 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF6Q9Y252 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF6Q9Y252 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.92■□□□□ 0.3
RNF6Q9Y252 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF6Q9Y252 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF6Q9Y252 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RNF6Q9Y252 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
RNF6Q9Y252 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.91■□□□□ 0.3
RNF6Q9Y252 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.91■□□□□ 0.3
RNF6Q9Y252 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF6Q9Y252 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF6Q9Y252 AL357033.4-201ENST00000617703 1807 ntBASIC16.91■□□□□ 0.3
RNF6Q9Y252 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF6Q9Y252 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RNF6Q9Y252 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.91■□□□□ 0.3
RNF6Q9Y252 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RNF6Q9Y252 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RNF6Q9Y252 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RNF6Q9Y252 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF6Q9Y252 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RNF6Q9Y252 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
RNF6Q9Y252 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.91■□□□□ 0.3
RNF6Q9Y252 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.91■□□□□ 0.3
RNF6Q9Y252 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF6Q9Y252 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.91■□□□□ 0.3
RNF6Q9Y252 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.91■□□□□ 0.3
RNF6Q9Y252 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.91■□□□□ 0.3
RNF6Q9Y252 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.91■□□□□ 0.3
RNF6Q9Y252 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RNF6Q9Y252 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.91■□□□□ 0.3
RNF6Q9Y252 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.91■□□□□ 0.3
RNF6Q9Y252 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.91■□□□□ 0.3
RNF6Q9Y252 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.91■□□□□ 0.3
RNF6Q9Y252 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.91■□□□□ 0.3
RNF6Q9Y252 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.91■□□□□ 0.3
RNF6Q9Y252 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
RNF6Q9Y252 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF6Q9Y252 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.91■□□□□ 0.3
RNF6Q9Y252 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.91■□□□□ 0.3
RNF6Q9Y252 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF6Q9Y252 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF6Q9Y252 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF6Q9Y252 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
RNF6Q9Y252 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RNF6Q9Y252 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
RNF6Q9Y252 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF6Q9Y252 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF6Q9Y252 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RNF6Q9Y252 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF6Q9Y252 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.91■□□□□ 0.3
RNF6Q9Y252 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.91■□□□□ 0.3
RNF6Q9Y252 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF6Q9Y252 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF6Q9Y252 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF6Q9Y252 FLJ13224-201ENST00000313737 1514 ntBASIC16.91■□□□□ 0.3
RNF6Q9Y252 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF6Q9Y252 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF6Q9Y252 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF6Q9Y252 AC084018.2-201ENST00000613093 2607 ntBASIC16.9■□□□□ 0.3
RNF6Q9Y252 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF6Q9Y252 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF6Q9Y252 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.9■□□□□ 0.3
RNF6Q9Y252 AC108860.2-201ENST00000562760 2183 ntBASIC16.9■□□□□ 0.3
RNF6Q9Y252 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF6Q9Y252 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
RNF6Q9Y252 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.9■□□□□ 0.3
RNF6Q9Y252 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
RNF6Q9Y252 AC112907.2-201ENST00000448639 330 ntBASIC16.9■□□□□ 0.3
RNF6Q9Y252 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.9■□□□□ 0.3
RNF6Q9Y252 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF6Q9Y252 VENTXP5-201ENST00000523979 775 ntBASIC16.9■□□□□ 0.3
RNF6Q9Y252 NEK4P2-201ENST00000580004 1012 ntBASIC16.9■□□□□ 0.3
RNF6Q9Y252 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF6Q9Y252 AL121894.2-201ENST00000602977 491 ntBASIC16.9■□□□□ 0.3
RNF6Q9Y252 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF6Q9Y252 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF6Q9Y252 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF6Q9Y252 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF6Q9Y252 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF6Q9Y252 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.9■□□□□ 0.3
RNF6Q9Y252 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.9■□□□□ 0.3
RNF6Q9Y252 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
RNF6Q9Y252 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF6Q9Y252 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF6Q9Y252 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF6Q9Y252 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF6Q9Y252 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms