Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
VTI1BQ9UEU0 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
VTI1BQ9UEU0 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VTI1BQ9UEU0 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
VTI1BQ9UEU0 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VTI1BQ9UEU0 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VTI1BQ9UEU0 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VTI1BQ9UEU0 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VTI1BQ9UEU0 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
VTI1BQ9UEU0 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
VTI1BQ9UEU0 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.66■□□□□ 0.42
VTI1BQ9UEU0 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VTI1BQ9UEU0 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VTI1BQ9UEU0 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VTI1BQ9UEU0 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VTI1BQ9UEU0 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
VTI1BQ9UEU0 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VTI1BQ9UEU0 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VTI1BQ9UEU0 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.65■□□□□ 0.42
VTI1BQ9UEU0 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VTI1BQ9UEU0 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.65■□□□□ 0.42
VTI1BQ9UEU0 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VTI1BQ9UEU0 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.65■□□□□ 0.42
VTI1BQ9UEU0 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VTI1BQ9UEU0 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.65■□□□□ 0.42
VTI1BQ9UEU0 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.65■□□□□ 0.42
VTI1BQ9UEU0 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.65■□□□□ 0.42
VTI1BQ9UEU0 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.65■□□□□ 0.42
VTI1BQ9UEU0 FAM87A-204ENST00000613235 858 ntBASIC17.65■□□□□ 0.42
VTI1BQ9UEU0 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VTI1BQ9UEU0 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
VTI1BQ9UEU0 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
VTI1BQ9UEU0 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
VTI1BQ9UEU0 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.65■□□□□ 0.42
VTI1BQ9UEU0 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VTI1BQ9UEU0 AL355312.1-201ENST00000407115 2176 ntBASIC17.64■□□□□ 0.42
VTI1BQ9UEU0 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
VTI1BQ9UEU0 AC133963.1-201ENST00000504166 1679 ntBASIC17.64■□□□□ 0.42
VTI1BQ9UEU0 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
VTI1BQ9UEU0 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VTI1BQ9UEU0 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.64■□□□□ 0.41
VTI1BQ9UEU0 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
VTI1BQ9UEU0 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
VTI1BQ9UEU0 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
VTI1BQ9UEU0 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
VTI1BQ9UEU0 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VTI1BQ9UEU0 LINC00602-201ENST00000629776 2065 ntBASIC17.64■□□□□ 0.41
VTI1BQ9UEU0 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.64■□□□□ 0.41
VTI1BQ9UEU0 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VTI1BQ9UEU0 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.64■□□□□ 0.41
VTI1BQ9UEU0 HMGA1P5-201ENST00000412453 271 ntBASIC17.64■□□□□ 0.41
VTI1BQ9UEU0 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.64■□□□□ 0.41
VTI1BQ9UEU0 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.64■□□□□ 0.41
VTI1BQ9UEU0 KRT18P23-201ENST00000435622 1283 ntBASIC17.64■□□□□ 0.41
VTI1BQ9UEU0 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.64■□□□□ 0.41
VTI1BQ9UEU0 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.64■□□□□ 0.41
VTI1BQ9UEU0 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VTI1BQ9UEU0 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
VTI1BQ9UEU0 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.64■□□□□ 0.41
VTI1BQ9UEU0 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.64■□□□□ 0.41
VTI1BQ9UEU0 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.64■□□□□ 0.41
VTI1BQ9UEU0 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
VTI1BQ9UEU0 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.64■□□□□ 0.41
VTI1BQ9UEU0 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VTI1BQ9UEU0 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.64■□□□□ 0.41
VTI1BQ9UEU0 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
VTI1BQ9UEU0 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.64■□□□□ 0.41
VTI1BQ9UEU0 AP001094.4-201ENST00000579008 2176 ntBASIC17.64■□□□□ 0.41
VTI1BQ9UEU0 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VTI1BQ9UEU0 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
VTI1BQ9UEU0 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VTI1BQ9UEU0 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.64■□□□□ 0.41
VTI1BQ9UEU0 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VTI1BQ9UEU0 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
VTI1BQ9UEU0 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VTI1BQ9UEU0 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.64■□□□□ 0.41
VTI1BQ9UEU0 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
VTI1BQ9UEU0 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.64■□□□□ 0.41
VTI1BQ9UEU0 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VTI1BQ9UEU0 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
VTI1BQ9UEU0 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
VTI1BQ9UEU0 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VTI1BQ9UEU0 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.63■□□□□ 0.41
VTI1BQ9UEU0 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VTI1BQ9UEU0 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
VTI1BQ9UEU0 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VTI1BQ9UEU0 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.63■□□□□ 0.41
VTI1BQ9UEU0 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VTI1BQ9UEU0 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VTI1BQ9UEU0 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
VTI1BQ9UEU0 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.63■□□□□ 0.41
VTI1BQ9UEU0 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
VTI1BQ9UEU0 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.63■□□□□ 0.41
VTI1BQ9UEU0 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
VTI1BQ9UEU0 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.63■□□□□ 0.41
VTI1BQ9UEU0 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.63■□□□□ 0.41
VTI1BQ9UEU0 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.63■□□□□ 0.41
VTI1BQ9UEU0 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
VTI1BQ9UEU0 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
VTI1BQ9UEU0 AC005363.2-201ENST00000618631 242 ntBASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms