Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 PHGDH-209ENST00000641074 1780 ntBASIC16.07■□□□□ 0.16
PARPBPQ9NWS1 AC093677.2-201ENST00000600169 1863 ntBASIC16.07■□□□□ 0.16
PARPBPQ9NWS1 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.07■□□□□ 0.16
PARPBPQ9NWS1 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
PARPBPQ9NWS1 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.07■□□□□ 0.16
PARPBPQ9NWS1 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.07■□□□□ 0.16
PARPBPQ9NWS1 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PARPBPQ9NWS1 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.07■□□□□ 0.16
PARPBPQ9NWS1 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PARPBPQ9NWS1 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
PARPBPQ9NWS1 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PARPBPQ9NWS1 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PARPBPQ9NWS1 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.06■□□□□ 0.16
PARPBPQ9NWS1 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PARPBPQ9NWS1 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PARPBPQ9NWS1 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.06■□□□□ 0.16
PARPBPQ9NWS1 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.06■□□□□ 0.16
PARPBPQ9NWS1 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.06■□□□□ 0.16
PARPBPQ9NWS1 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PARPBPQ9NWS1 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.06■□□□□ 0.16
PARPBPQ9NWS1 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PARPBPQ9NWS1 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PARPBPQ9NWS1 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PARPBPQ9NWS1 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PARPBPQ9NWS1 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.06■□□□□ 0.16
PARPBPQ9NWS1 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PARPBPQ9NWS1 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PARPBPQ9NWS1 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.06■□□□□ 0.16
PARPBPQ9NWS1 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.06■□□□□ 0.16
PARPBPQ9NWS1 RNF126P1-202ENST00000569893 925 ntBASIC16.06■□□□□ 0.16
PARPBPQ9NWS1 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PARPBPQ9NWS1 AC004263.2-201ENST00000617183 678 ntBASIC16.06■□□□□ 0.16
PARPBPQ9NWS1 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PARPBPQ9NWS1 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PARPBPQ9NWS1 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PARPBPQ9NWS1 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PARPBPQ9NWS1 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PARPBPQ9NWS1 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PARPBPQ9NWS1 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PARPBPQ9NWS1 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PARPBPQ9NWS1 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PARPBPQ9NWS1 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PARPBPQ9NWS1 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PARPBPQ9NWS1 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PARPBPQ9NWS1 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PARPBPQ9NWS1 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.05■□□□□ 0.16
PARPBPQ9NWS1 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PARPBPQ9NWS1 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PARPBPQ9NWS1 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PARPBPQ9NWS1 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PARPBPQ9NWS1 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.05■□□□□ 0.16
PARPBPQ9NWS1 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
PARPBPQ9NWS1 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.05■□□□□ 0.16
PARPBPQ9NWS1 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.05■□□□□ 0.16
PARPBPQ9NWS1 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
PARPBPQ9NWS1 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.05■□□□□ 0.16
PARPBPQ9NWS1 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
PARPBPQ9NWS1 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PARPBPQ9NWS1 AC022898.2-201ENST00000616822 1312 ntBASIC16.05■□□□□ 0.16
PARPBPQ9NWS1 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PARPBPQ9NWS1 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PARPBPQ9NWS1 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.05■□□□□ 0.16
PARPBPQ9NWS1 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PARPBPQ9NWS1 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PARPBPQ9NWS1 KRT18P65-201ENST00000439811 1286 ntBASIC16.05■□□□□ 0.16
PARPBPQ9NWS1 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PARPBPQ9NWS1 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.05■□□□□ 0.16
PARPBPQ9NWS1 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PARPBPQ9NWS1 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.05■□□□□ 0.16
PARPBPQ9NWS1 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.05■□□□□ 0.16
PARPBPQ9NWS1 AC009154.2-201ENST00000621177 724 ntBASIC16.05■□□□□ 0.16
PARPBPQ9NWS1 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.05■□□□□ 0.16
PARPBPQ9NWS1 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PARPBPQ9NWS1 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PARPBPQ9NWS1 LINC00602-201ENST00000629776 2065 ntBASIC16.05■□□□□ 0.16
PARPBPQ9NWS1 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
PARPBPQ9NWS1 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PARPBPQ9NWS1 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PARPBPQ9NWS1 AC135776.1-201ENST00000319817 2481 ntBASIC16.05■□□□□ 0.16
PARPBPQ9NWS1 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
PARPBPQ9NWS1 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PARPBPQ9NWS1 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PARPBPQ9NWS1 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PARPBPQ9NWS1 AC093010.1-201ENST00000473625 1624 ntBASIC16.05■□□□□ 0.16
PARPBPQ9NWS1 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PARPBPQ9NWS1 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PARPBPQ9NWS1 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.04■□□□□ 0.16
PARPBPQ9NWS1 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PARPBPQ9NWS1 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PARPBPQ9NWS1 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.04■□□□□ 0.16
PARPBPQ9NWS1 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PARPBPQ9NWS1 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PARPBPQ9NWS1 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PARPBPQ9NWS1 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PARPBPQ9NWS1 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PARPBPQ9NWS1 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PARPBPQ9NWS1 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PARPBPQ9NWS1 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
PARPBPQ9NWS1 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PARPBPQ9NWS1 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms