Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC25.5■■□□□ 1.67
SLC52A1Q9NWF4 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
SLC52A1Q9NWF4 AL031432.2-201ENST00000566714 459 ntBASIC25.5■■□□□ 1.67
SLC52A1Q9NWF4 AL928711.1-201ENST00000570165 459 ntBASIC25.5■■□□□ 1.67
SLC52A1Q9NWF4 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC25.5■■□□□ 1.67
SLC52A1Q9NWF4 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC25.5■■□□□ 1.67
SLC52A1Q9NWF4 METTL23-205ENST00000588302 925 ntTSL 5 BASIC25.5■■□□□ 1.67
SLC52A1Q9NWF4 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
SLC52A1Q9NWF4 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SLC52A1Q9NWF4 ORC5-208ENST00000626700 344 ntTSL 3 BASIC25.5■■□□□ 1.67
SLC52A1Q9NWF4 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
SLC52A1Q9NWF4 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC25.49■■□□□ 1.67
SLC52A1Q9NWF4 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SLC52A1Q9NWF4 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SLC52A1Q9NWF4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
SLC52A1Q9NWF4 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
SLC52A1Q9NWF4 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC25.49■■□□□ 1.67
SLC52A1Q9NWF4 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC25.49■■□□□ 1.67
SLC52A1Q9NWF4 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
SLC52A1Q9NWF4 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
SLC52A1Q9NWF4 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC25.49■■□□□ 1.67
SLC52A1Q9NWF4 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC25.49■■□□□ 1.67
SLC52A1Q9NWF4 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC25.49■■□□□ 1.67
SLC52A1Q9NWF4 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC25.49■■□□□ 1.67
SLC52A1Q9NWF4 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC25.49■■□□□ 1.67
SLC52A1Q9NWF4 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC25.49■■□□□ 1.67
SLC52A1Q9NWF4 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC25.49■■□□□ 1.67
SLC52A1Q9NWF4 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC25.49■■□□□ 1.67
SLC52A1Q9NWF4 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC25.49■■□□□ 1.67
SLC52A1Q9NWF4 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SLC52A1Q9NWF4 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC25.49■■□□□ 1.67
SLC52A1Q9NWF4 AC010507.1-201ENST00000633895 436 ntBASIC25.49■■□□□ 1.67
SLC52A1Q9NWF4 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC25.49■■□□□ 1.67
SLC52A1Q9NWF4 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SLC52A1Q9NWF4 SP100-208ENST00000427101 1922 ntTSL 2 BASIC25.49■■□□□ 1.67
SLC52A1Q9NWF4 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC25.49■■□□□ 1.67
SLC52A1Q9NWF4 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC25.48■■□□□ 1.67
SLC52A1Q9NWF4 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC25.48■■□□□ 1.67
SLC52A1Q9NWF4 AC126763.1-201ENST00000552015 2118 ntBASIC25.48■■□□□ 1.67
SLC52A1Q9NWF4 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
SLC52A1Q9NWF4 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SLC52A1Q9NWF4 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SLC52A1Q9NWF4 PNMT-202ENST00000394246 821 ntTSL 2 BASIC25.48■■□□□ 1.67
SLC52A1Q9NWF4 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC25.48■■□□□ 1.67
SLC52A1Q9NWF4 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC25.48■■□□□ 1.67
SLC52A1Q9NWF4 POLD4-207ENST00000531239 584 ntTSL 2 BASIC25.48■■□□□ 1.67
SLC52A1Q9NWF4 PUS1-205ENST00000535067 838 ntTSL 3 BASIC25.48■■□□□ 1.67
SLC52A1Q9NWF4 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SLC52A1Q9NWF4 CD63-210ENST00000550776 870 ntTSL 5 BASIC25.48■■□□□ 1.67
SLC52A1Q9NWF4 OR7E47P-204ENST00000575924 449 ntBASIC25.48■■□□□ 1.67
SLC52A1Q9NWF4 STK25P1-201ENST00000585406 838 ntBASIC25.48■■□□□ 1.67
SLC52A1Q9NWF4 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC25.48■■□□□ 1.67
SLC52A1Q9NWF4 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC25.48■■□□□ 1.67
SLC52A1Q9NWF4 AC027612.4-201ENST00000605371 583 ntBASIC25.48■■□□□ 1.67
SLC52A1Q9NWF4 AQP6-205ENST00000618286 829 ntTSL 5 BASIC25.48■■□□□ 1.67
SLC52A1Q9NWF4 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SLC52A1Q9NWF4 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC25.47■■□□□ 1.67
SLC52A1Q9NWF4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC25.47■■□□□ 1.67
SLC52A1Q9NWF4 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC25.47■■□□□ 1.67
SLC52A1Q9NWF4 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
SLC52A1Q9NWF4 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SLC52A1Q9NWF4 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SLC52A1Q9NWF4 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
SLC52A1Q9NWF4 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC25.47■■□□□ 1.67
SLC52A1Q9NWF4 AP002414.1-201ENST00000391405 1147 ntBASIC25.47■■□□□ 1.67
SLC52A1Q9NWF4 ACTG1P14-201ENST00000446382 1122 ntBASIC25.47■■□□□ 1.67
SLC52A1Q9NWF4 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SLC52A1Q9NWF4 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC25.47■■□□□ 1.67
SLC52A1Q9NWF4 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC25.47■■□□□ 1.67
SLC52A1Q9NWF4 KRT19P2-202ENST00000557173 1012 ntBASIC25.47■■□□□ 1.67
SLC52A1Q9NWF4 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
SLC52A1Q9NWF4 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC25.47■■□□□ 1.67
SLC52A1Q9NWF4 AC004877.2-201ENST00000623941 599 ntBASIC25.47■■□□□ 1.67
SLC52A1Q9NWF4 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SLC52A1Q9NWF4 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SLC52A1Q9NWF4 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SLC52A1Q9NWF4 PC-214ENST00000628663 1470 ntTSL 5 BASIC25.47■■□□□ 1.67
SLC52A1Q9NWF4 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
SLC52A1Q9NWF4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
SLC52A1Q9NWF4 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC25.46■■□□□ 1.67
SLC52A1Q9NWF4 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SLC52A1Q9NWF4 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
SLC52A1Q9NWF4 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
SLC52A1Q9NWF4 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC25.46■■□□□ 1.67
SLC52A1Q9NWF4 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC25.46■■□□□ 1.67
SLC52A1Q9NWF4 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC25.46■■□□□ 1.67
SLC52A1Q9NWF4 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC25.46■■□□□ 1.67
SLC52A1Q9NWF4 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SLC52A1Q9NWF4 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC25.46■■□□□ 1.67
SLC52A1Q9NWF4 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC25.46■■□□□ 1.67
SLC52A1Q9NWF4 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SLC52A1Q9NWF4 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SLC52A1Q9NWF4 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
SLC52A1Q9NWF4 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SLC52A1Q9NWF4 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC25.46■■□□□ 1.67
SLC52A1Q9NWF4 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SLC52A1Q9NWF4 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
SLC52A1Q9NWF4 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC25.46■■□□□ 1.67
SLC52A1Q9NWF4 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC25.45■■□□□ 1.67
SLC52A1Q9NWF4 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms