Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
BLOC1S4Q9NUP1 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BLOC1S4Q9NUP1 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.93■□□□□ 0.78
BLOC1S4Q9NUP1 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
BLOC1S4Q9NUP1 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
BLOC1S4Q9NUP1 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
BLOC1S4Q9NUP1 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BLOC1S4Q9NUP1 AL355312.1-201ENST00000407115 2176 ntBASIC19.93■□□□□ 0.78
BLOC1S4Q9NUP1 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
BLOC1S4Q9NUP1 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BLOC1S4Q9NUP1 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.93■□□□□ 0.78
BLOC1S4Q9NUP1 AP002383.4-201ENST00000442518 975 ntBASIC19.93■□□□□ 0.78
BLOC1S4Q9NUP1 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.93■□□□□ 0.78
BLOC1S4Q9NUP1 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.93■□□□□ 0.78
BLOC1S4Q9NUP1 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
BLOC1S4Q9NUP1 AC090616.6-201ENST00000582640 721 ntBASIC19.93■□□□□ 0.78
BLOC1S4Q9NUP1 AL121672.3-201ENST00000608644 468 ntBASIC19.93■□□□□ 0.78
BLOC1S4Q9NUP1 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
BLOC1S4Q9NUP1 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
BLOC1S4Q9NUP1 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
BLOC1S4Q9NUP1 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.93■□□□□ 0.78
BLOC1S4Q9NUP1 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BLOC1S4Q9NUP1 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.92■□□□□ 0.78
BLOC1S4Q9NUP1 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BLOC1S4Q9NUP1 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.92■□□□□ 0.78
BLOC1S4Q9NUP1 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BLOC1S4Q9NUP1 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BLOC1S4Q9NUP1 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.92■□□□□ 0.78
BLOC1S4Q9NUP1 CHCHD2P8-201ENST00000429873 447 ntBASIC19.92■□□□□ 0.78
BLOC1S4Q9NUP1 DDX43P3-201ENST00000441064 443 ntBASIC19.92■□□□□ 0.78
BLOC1S4Q9NUP1 BX276092.5-203ENST00000456199 560 ntBASIC19.92■□□□□ 0.78
BLOC1S4Q9NUP1 AC091607.1-201ENST00000490318 1060 ntBASIC19.92■□□□□ 0.78
BLOC1S4Q9NUP1 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
BLOC1S4Q9NUP1 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.92■□□□□ 0.78
BLOC1S4Q9NUP1 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.92■□□□□ 0.78
BLOC1S4Q9NUP1 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.92■□□□□ 0.78
BLOC1S4Q9NUP1 AP000550.4-202ENST00000639755 178 ntBASIC19.92■□□□□ 0.78
BLOC1S4Q9NUP1 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BLOC1S4Q9NUP1 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BLOC1S4Q9NUP1 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.92■□□□□ 0.78
BLOC1S4Q9NUP1 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.92■□□□□ 0.78
BLOC1S4Q9NUP1 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
BLOC1S4Q9NUP1 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BLOC1S4Q9NUP1 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BLOC1S4Q9NUP1 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.91■□□□□ 0.78
BLOC1S4Q9NUP1 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BLOC1S4Q9NUP1 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BLOC1S4Q9NUP1 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
BLOC1S4Q9NUP1 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.91■□□□□ 0.78
BLOC1S4Q9NUP1 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
BLOC1S4Q9NUP1 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
BLOC1S4Q9NUP1 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
BLOC1S4Q9NUP1 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
BLOC1S4Q9NUP1 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BLOC1S4Q9NUP1 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.91■□□□□ 0.78
BLOC1S4Q9NUP1 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BLOC1S4Q9NUP1 ARMC10P1-201ENST00000313754 855 ntBASIC19.91■□□□□ 0.78
BLOC1S4Q9NUP1 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
BLOC1S4Q9NUP1 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
BLOC1S4Q9NUP1 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
BLOC1S4Q9NUP1 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
BLOC1S4Q9NUP1 AC096633.1-201ENST00000422446 749 ntBASIC19.91■□□□□ 0.78
BLOC1S4Q9NUP1 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
BLOC1S4Q9NUP1 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
BLOC1S4Q9NUP1 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.91■□□□□ 0.78
BLOC1S4Q9NUP1 AC005336.2-201ENST00000593183 939 ntBASIC19.91■□□□□ 0.78
BLOC1S4Q9NUP1 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
BLOC1S4Q9NUP1 IGHV3-41-201ENST00000613121 348 ntBASIC19.91■□□□□ 0.78
BLOC1S4Q9NUP1 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.91■□□□□ 0.78
BLOC1S4Q9NUP1 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BLOC1S4Q9NUP1 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BLOC1S4Q9NUP1 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.91■□□□□ 0.78
BLOC1S4Q9NUP1 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BLOC1S4Q9NUP1 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BLOC1S4Q9NUP1 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
BLOC1S4Q9NUP1 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
BLOC1S4Q9NUP1 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
BLOC1S4Q9NUP1 LETM1P2-201ENST00000597330 2178 ntBASIC19.91■□□□□ 0.78
BLOC1S4Q9NUP1 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
BLOC1S4Q9NUP1 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
BLOC1S4Q9NUP1 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
BLOC1S4Q9NUP1 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
BLOC1S4Q9NUP1 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
BLOC1S4Q9NUP1 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.91■□□□□ 0.78
BLOC1S4Q9NUP1 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.91■□□□□ 0.78
BLOC1S4Q9NUP1 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
BLOC1S4Q9NUP1 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.9■□□□□ 0.78
BLOC1S4Q9NUP1 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
BLOC1S4Q9NUP1 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BLOC1S4Q9NUP1 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
BLOC1S4Q9NUP1 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
BLOC1S4Q9NUP1 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
BLOC1S4Q9NUP1 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
BLOC1S4Q9NUP1 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
BLOC1S4Q9NUP1 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
BLOC1S4Q9NUP1 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
BLOC1S4Q9NUP1 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.9■□□□□ 0.78
BLOC1S4Q9NUP1 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.9■□□□□ 0.78
BLOC1S4Q9NUP1 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
BLOC1S4Q9NUP1 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms