Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 SRC-202ENST00000373558 4304 ntTSL 5 BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 CNTNAP3P2-201ENST00000617175 3861 ntBASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 EBPL-202ENST00000378268 680 ntTSL 3 BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 AC009090.5-201ENST00000624886 2285 ntBASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 AC106881.1-201ENST00000605849 3329 ntBASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC9.16□□□□□ -0.94
CDC42SE1Q9NRR8 AC008556.1-201ENST00000610908 2040 ntBASIC9.15□□□□□ -0.94
CDC42SE1Q9NRR8 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
CDC42SE1Q9NRR8 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
CDC42SE1Q9NRR8 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
CDC42SE1Q9NRR8 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
CDC42SE1Q9NRR8 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC9.15□□□□□ -0.94
CDC42SE1Q9NRR8 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
CDC42SE1Q9NRR8 COBL-210ENST00000632460 1941 ntTSL 5 BASIC9.15□□□□□ -0.94
CDC42SE1Q9NRR8 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
CDC42SE1Q9NRR8 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
CDC42SE1Q9NRR8 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC9.15□□□□□ -0.94
CDC42SE1Q9NRR8 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
CDC42SE1Q9NRR8 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
CDC42SE1Q9NRR8 ST20-AS1-201ENST00000560255 4223 ntBASIC9.15□□□□□ -0.94
CDC42SE1Q9NRR8 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
CDC42SE1Q9NRR8 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
CDC42SE1Q9NRR8 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
CDC42SE1Q9NRR8 AC007292.2-201ENST00000593524 1812 ntBASIC9.15□□□□□ -0.94
CDC42SE1Q9NRR8 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
CDC42SE1Q9NRR8 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC9.15□□□□□ -0.94
CDC42SE1Q9NRR8 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
CDC42SE1Q9NRR8 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC9.15□□□□□ -0.94
CDC42SE1Q9NRR8 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
CDC42SE1Q9NRR8 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
CDC42SE1Q9NRR8 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
CDC42SE1Q9NRR8 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
CDC42SE1Q9NRR8 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
CDC42SE1Q9NRR8 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
CDC42SE1Q9NRR8 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC9.15□□□□□ -0.94
CDC42SE1Q9NRR8 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
CDC42SE1Q9NRR8 NME9-203ENST00000383180 2133 ntTSL 2 BASIC9.15□□□□□ -0.94
CDC42SE1Q9NRR8 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
CDC42SE1Q9NRR8 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
CDC42SE1Q9NRR8 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
CDC42SE1Q9NRR8 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
CDC42SE1Q9NRR8 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
CDC42SE1Q9NRR8 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms