Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
KLHL1Q9NR64 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
KLHL1Q9NR64 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.91■□□□□ 0.3
KLHL1Q9NR64 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
KLHL1Q9NR64 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
KLHL1Q9NR64 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KLHL1Q9NR64 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
KLHL1Q9NR64 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.91■□□□□ 0.3
KLHL1Q9NR64 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.91■□□□□ 0.3
KLHL1Q9NR64 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
KLHL1Q9NR64 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KLHL1Q9NR64 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KLHL1Q9NR64 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
KLHL1Q9NR64 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
KLHL1Q9NR64 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.91■□□□□ 0.3
KLHL1Q9NR64 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.91■□□□□ 0.3
KLHL1Q9NR64 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.91■□□□□ 0.3
KLHL1Q9NR64 AP002414.4-201ENST00000589764 1148 ntBASIC16.91■□□□□ 0.3
KLHL1Q9NR64 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.91■□□□□ 0.3
KLHL1Q9NR64 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
KLHL1Q9NR64 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
KLHL1Q9NR64 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KLHL1Q9NR64 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KLHL1Q9NR64 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
KLHL1Q9NR64 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
KLHL1Q9NR64 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
KLHL1Q9NR64 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.91■□□□□ 0.3
KLHL1Q9NR64 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
KLHL1Q9NR64 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KLHL1Q9NR64 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KLHL1Q9NR64 KRT18P1-202ENST00000452408 1331 ntBASIC16.91■□□□□ 0.3
KLHL1Q9NR64 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
KLHL1Q9NR64 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.91■□□□□ 0.3
KLHL1Q9NR64 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KLHL1Q9NR64 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
KLHL1Q9NR64 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
KLHL1Q9NR64 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
KLHL1Q9NR64 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
KLHL1Q9NR64 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.91■□□□□ 0.3
KLHL1Q9NR64 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
KLHL1Q9NR64 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
KLHL1Q9NR64 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KLHL1Q9NR64 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.9■□□□□ 0.3
KLHL1Q9NR64 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.9■□□□□ 0.3
KLHL1Q9NR64 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KLHL1Q9NR64 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
KLHL1Q9NR64 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
KLHL1Q9NR64 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KLHL1Q9NR64 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KLHL1Q9NR64 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.9■□□□□ 0.3
KLHL1Q9NR64 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KLHL1Q9NR64 Z83836.1-201ENST00000624605 1642 ntBASIC16.9■□□□□ 0.3
KLHL1Q9NR64 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KLHL1Q9NR64 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KLHL1Q9NR64 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KLHL1Q9NR64 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KLHL1Q9NR64 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
KLHL1Q9NR64 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
KLHL1Q9NR64 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.9■□□□□ 0.3
KLHL1Q9NR64 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
KLHL1Q9NR64 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
KLHL1Q9NR64 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
KLHL1Q9NR64 AP002383.4-201ENST00000442518 975 ntBASIC16.9■□□□□ 0.3
KLHL1Q9NR64 AP003733.1-201ENST00000491725 852 ntBASIC16.9■□□□□ 0.3
KLHL1Q9NR64 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
KLHL1Q9NR64 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KLHL1Q9NR64 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KLHL1Q9NR64 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KLHL1Q9NR64 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
KLHL1Q9NR64 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KLHL1Q9NR64 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KLHL1Q9NR64 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.9■□□□□ 0.3
KLHL1Q9NR64 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KLHL1Q9NR64 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
KLHL1Q9NR64 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KLHL1Q9NR64 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KLHL1Q9NR64 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.9■□□□□ 0.3
KLHL1Q9NR64 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.9■□□□□ 0.3
KLHL1Q9NR64 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.9■□□□□ 0.3
KLHL1Q9NR64 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.9■□□□□ 0.3
KLHL1Q9NR64 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
KLHL1Q9NR64 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.89■□□□□ 0.3
KLHL1Q9NR64 BICD1-207ENST00000551848 1962 ntBASIC16.89■□□□□ 0.3
KLHL1Q9NR64 AL499627.1-201ENST00000569373 2188 ntBASIC16.89■□□□□ 0.3
KLHL1Q9NR64 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
KLHL1Q9NR64 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
KLHL1Q9NR64 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KLHL1Q9NR64 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KLHL1Q9NR64 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
KLHL1Q9NR64 AL354751.1-201ENST00000412768 1863 ntBASIC16.89■□□□□ 0.29
KLHL1Q9NR64 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
KLHL1Q9NR64 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.89■□□□□ 0.29
KLHL1Q9NR64 CHCHD2P8-201ENST00000429873 447 ntBASIC16.89■□□□□ 0.29
KLHL1Q9NR64 PVRIG2P-201ENST00000435460 978 ntBASIC16.89■□□□□ 0.29
KLHL1Q9NR64 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.89■□□□□ 0.29
KLHL1Q9NR64 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.89■□□□□ 0.29
KLHL1Q9NR64 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.89■□□□□ 0.29
KLHL1Q9NR64 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.89■□□□□ 0.29
KLHL1Q9NR64 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
KLHL1Q9NR64 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms