Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
DDX47Q9H0S4 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.7■□□□□ 0.58
DDX47Q9H0S4 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX47Q9H0S4 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX47Q9H0S4 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
DDX47Q9H0S4 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX47Q9H0S4 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
DDX47Q9H0S4 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX47Q9H0S4 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX47Q9H0S4 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.7■□□□□ 0.58
DDX47Q9H0S4 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
DDX47Q9H0S4 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.69■□□□□ 0.58
DDX47Q9H0S4 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
DDX47Q9H0S4 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.69■□□□□ 0.58
DDX47Q9H0S4 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
DDX47Q9H0S4 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.69■□□□□ 0.58
DDX47Q9H0S4 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
DDX47Q9H0S4 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
DDX47Q9H0S4 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
DDX47Q9H0S4 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DDX47Q9H0S4 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DDX47Q9H0S4 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
DDX47Q9H0S4 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.69■□□□□ 0.58
DDX47Q9H0S4 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.69■□□□□ 0.58
DDX47Q9H0S4 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.69■□□□□ 0.58
DDX47Q9H0S4 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
DDX47Q9H0S4 AC112497.1-201ENST00000624824 639 ntBASIC18.69■□□□□ 0.58
DDX47Q9H0S4 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
DDX47Q9H0S4 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.69■□□□□ 0.58
DDX47Q9H0S4 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.69■□□□□ 0.58
DDX47Q9H0S4 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.69■□□□□ 0.58
DDX47Q9H0S4 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DDX47Q9H0S4 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
DDX47Q9H0S4 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
DDX47Q9H0S4 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DDX47Q9H0S4 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
DDX47Q9H0S4 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
DDX47Q9H0S4 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
DDX47Q9H0S4 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
DDX47Q9H0S4 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.69■□□□□ 0.58
DDX47Q9H0S4 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
DDX47Q9H0S4 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
DDX47Q9H0S4 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
DDX47Q9H0S4 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.68■□□□□ 0.58
DDX47Q9H0S4 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
DDX47Q9H0S4 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.68■□□□□ 0.58
DDX47Q9H0S4 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
DDX47Q9H0S4 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.68■□□□□ 0.58
DDX47Q9H0S4 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DDX47Q9H0S4 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
DDX47Q9H0S4 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DDX47Q9H0S4 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DDX47Q9H0S4 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.68■□□□□ 0.58
DDX47Q9H0S4 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
DDX47Q9H0S4 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
DDX47Q9H0S4 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.68■□□□□ 0.58
DDX47Q9H0S4 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.68■□□□□ 0.58
DDX47Q9H0S4 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.68■□□□□ 0.58
DDX47Q9H0S4 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.68■□□□□ 0.58
DDX47Q9H0S4 AL353719.1-201ENST00000566847 864 ntBASIC18.68■□□□□ 0.58
DDX47Q9H0S4 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.68■□□□□ 0.58
DDX47Q9H0S4 AP005242.2-201ENST00000580065 1175 ntBASIC18.68■□□□□ 0.58
DDX47Q9H0S4 MIR3180-4-201ENST00000582223 153 ntBASIC18.68■□□□□ 0.58
DDX47Q9H0S4 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.68■□□□□ 0.58
DDX47Q9H0S4 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.68■□□□□ 0.58
DDX47Q9H0S4 AC113410.3-201ENST00000623366 203 ntBASIC18.68■□□□□ 0.58
DDX47Q9H0S4 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.68■□□□□ 0.58
DDX47Q9H0S4 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
DDX47Q9H0S4 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DDX47Q9H0S4 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.68■□□□□ 0.58
DDX47Q9H0S4 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
DDX47Q9H0S4 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DDX47Q9H0S4 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DDX47Q9H0S4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.68■□□□□ 0.58
DDX47Q9H0S4 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DDX47Q9H0S4 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
DDX47Q9H0S4 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDX47Q9H0S4 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDX47Q9H0S4 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDX47Q9H0S4 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DDX47Q9H0S4 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
DDX47Q9H0S4 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDX47Q9H0S4 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDX47Q9H0S4 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDX47Q9H0S4 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDX47Q9H0S4 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.67■□□□□ 0.58
DDX47Q9H0S4 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDX47Q9H0S4 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DDX47Q9H0S4 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.67■□□□□ 0.58
DDX47Q9H0S4 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.67■□□□□ 0.58
DDX47Q9H0S4 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.67■□□□□ 0.58
DDX47Q9H0S4 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDX47Q9H0S4 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDX47Q9H0S4 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
DDX47Q9H0S4 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDX47Q9H0S4 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
DDX47Q9H0S4 PKD1P1-201ENST00000458669 6805 ntBASIC18.67■□□□□ 0.58
DDX47Q9H0S4 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDX47Q9H0S4 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDX47Q9H0S4 AL121761.2-201ENST00000598007 1648 ntBASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms