Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC23.14■■□□□ 1.3
PCDH11XQ9BZA7 RPS15-207ENST00000591032 550 ntTSL 3 BASIC23.14■■□□□ 1.3
PCDH11XQ9BZA7 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC23.14■■□□□ 1.3
PCDH11XQ9BZA7 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC23.14■■□□□ 1.3
PCDH11XQ9BZA7 AC092865.6-201ENST00000642101 219 ntBASIC23.14■■□□□ 1.3
PCDH11XQ9BZA7 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PCDH11XQ9BZA7 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDH11XQ9BZA7 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
PCDH11XQ9BZA7 SP100-208ENST00000427101 1922 ntTSL 2 BASIC23.14■■□□□ 1.29
PCDH11XQ9BZA7 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PCDH11XQ9BZA7 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC23.13■■□□□ 1.29
PCDH11XQ9BZA7 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC23.13■■□□□ 1.29
PCDH11XQ9BZA7 VN2R19P-201ENST00000442399 1052 ntBASIC23.13■■□□□ 1.29
PCDH11XQ9BZA7 HCG4B-203ENST00000450128 991 ntBASIC23.13■■□□□ 1.29
PCDH11XQ9BZA7 RPS15P9-201ENST00000494093 319 ntBASIC23.13■■□□□ 1.29
PCDH11XQ9BZA7 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC23.13■■□□□ 1.29
PCDH11XQ9BZA7 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
PCDH11XQ9BZA7 MIR4469-201ENST00000583919 79 ntBASIC23.13■■□□□ 1.29
PCDH11XQ9BZA7 AL596442.2-201ENST00000610240 980 ntBASIC23.13■■□□□ 1.29
PCDH11XQ9BZA7 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC23.13■■□□□ 1.29
PCDH11XQ9BZA7 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDH11XQ9BZA7 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC23.13■■□□□ 1.29
PCDH11XQ9BZA7 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDH11XQ9BZA7 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PCDH11XQ9BZA7 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDH11XQ9BZA7 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDH11XQ9BZA7 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDH11XQ9BZA7 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDH11XQ9BZA7 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
PCDH11XQ9BZA7 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDH11XQ9BZA7 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC23.13■■□□□ 1.29
PCDH11XQ9BZA7 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PCDH11XQ9BZA7 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDH11XQ9BZA7 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
PCDH11XQ9BZA7 AC073592.3-201ENST00000625118 1834 ntBASIC23.13■■□□□ 1.29
PCDH11XQ9BZA7 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDH11XQ9BZA7 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDH11XQ9BZA7 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
PCDH11XQ9BZA7 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
PCDH11XQ9BZA7 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC23.12■■□□□ 1.29
PCDH11XQ9BZA7 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC23.12■■□□□ 1.29
PCDH11XQ9BZA7 METTL21AP1-201ENST00000438852 635 ntBASIC23.12■■□□□ 1.29
PCDH11XQ9BZA7 PRSS29P-201ENST00000440800 595 ntBASIC23.12■■□□□ 1.29
PCDH11XQ9BZA7 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PCDH11XQ9BZA7 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC23.12■■□□□ 1.29
PCDH11XQ9BZA7 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC23.12■■□□□ 1.29
PCDH11XQ9BZA7 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC23.12■■□□□ 1.29
PCDH11XQ9BZA7 AC018845.2-201ENST00000568326 409 ntBASIC23.12■■□□□ 1.29
PCDH11XQ9BZA7 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC23.12■■□□□ 1.29
PCDH11XQ9BZA7 AC019129.2-201ENST00000609837 1235 ntBASIC23.12■■□□□ 1.29
PCDH11XQ9BZA7 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
PCDH11XQ9BZA7 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDH11XQ9BZA7 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
PCDH11XQ9BZA7 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDH11XQ9BZA7 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PCDH11XQ9BZA7 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PCDH11XQ9BZA7 GID4-202ENST00000376345 1391 ntTSL 3 BASIC23.12■■□□□ 1.29
PCDH11XQ9BZA7 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PCDH11XQ9BZA7 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDH11XQ9BZA7 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
PCDH11XQ9BZA7 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC23.12■■□□□ 1.29
PCDH11XQ9BZA7 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDH11XQ9BZA7 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDH11XQ9BZA7 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PCDH11XQ9BZA7 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDH11XQ9BZA7 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC23.12■■□□□ 1.29
PCDH11XQ9BZA7 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC23.12■■□□□ 1.29
PCDH11XQ9BZA7 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDH11XQ9BZA7 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDH11XQ9BZA7 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
PCDH11XQ9BZA7 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDH11XQ9BZA7 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC23.11■■□□□ 1.29
PCDH11XQ9BZA7 CFL1-202ENST00000524553 860 ntTSL 2 BASIC23.11■■□□□ 1.29
PCDH11XQ9BZA7 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC23.11■■□□□ 1.29
PCDH11XQ9BZA7 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC23.11■■□□□ 1.29
PCDH11XQ9BZA7 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC23.11■■□□□ 1.29
PCDH11XQ9BZA7 KRT18P28-201ENST00000453838 1332 ntBASIC23.11■■□□□ 1.29
PCDH11XQ9BZA7 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC23.11■■□□□ 1.29
PCDH11XQ9BZA7 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC23.11■■□□□ 1.29
PCDH11XQ9BZA7 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDH11XQ9BZA7 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC23.11■■□□□ 1.29
PCDH11XQ9BZA7 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDH11XQ9BZA7 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
PCDH11XQ9BZA7 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDH11XQ9BZA7 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC23.1■■□□□ 1.29
PCDH11XQ9BZA7 AC254562.1-201ENST00000417586 456 ntBASIC23.1■■□□□ 1.29
PCDH11XQ9BZA7 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDH11XQ9BZA7 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC23.1■■□□□ 1.29
PCDH11XQ9BZA7 C20orf181-201ENST00000623918 480 ntBASIC23.1■■□□□ 1.29
PCDH11XQ9BZA7 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDH11XQ9BZA7 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC23.1■■□□□ 1.29
PCDH11XQ9BZA7 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDH11XQ9BZA7 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC23.1■■□□□ 1.29
PCDH11XQ9BZA7 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDH11XQ9BZA7 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC23.1■■□□□ 1.29
PCDH11XQ9BZA7 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDH11XQ9BZA7 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDH11XQ9BZA7 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDH11XQ9BZA7 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDH11XQ9BZA7 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms