Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RSPO3Q9BXY4 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RSPO3Q9BXY4 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RSPO3Q9BXY4 STARP1-201ENST00000397973 869 ntBASIC16.46■□□□□ 0.23
RSPO3Q9BXY4 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RSPO3Q9BXY4 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.46■□□□□ 0.23
RSPO3Q9BXY4 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.46■□□□□ 0.23
RSPO3Q9BXY4 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RSPO3Q9BXY4 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.46■□□□□ 0.23
RSPO3Q9BXY4 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.46■□□□□ 0.23
RSPO3Q9BXY4 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
RSPO3Q9BXY4 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
RSPO3Q9BXY4 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
RSPO3Q9BXY4 AC133561.5-201ENST00000635547 218 ntBASIC16.46■□□□□ 0.23
RSPO3Q9BXY4 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.46■□□□□ 0.23
RSPO3Q9BXY4 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.46■□□□□ 0.23
RSPO3Q9BXY4 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
RSPO3Q9BXY4 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RSPO3Q9BXY4 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RSPO3Q9BXY4 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
RSPO3Q9BXY4 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
RSPO3Q9BXY4 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RSPO3Q9BXY4 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
RSPO3Q9BXY4 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RSPO3Q9BXY4 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RSPO3Q9BXY4 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RSPO3Q9BXY4 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RSPO3Q9BXY4 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RSPO3Q9BXY4 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.45■□□□□ 0.22
RSPO3Q9BXY4 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RSPO3Q9BXY4 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.45■□□□□ 0.22
RSPO3Q9BXY4 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.45■□□□□ 0.22
RSPO3Q9BXY4 AC113347.1-201ENST00000413321 391 ntBASIC16.45■□□□□ 0.22
RSPO3Q9BXY4 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.45■□□□□ 0.22
RSPO3Q9BXY4 SPDYE13P-201ENST00000445314 798 ntBASIC16.45■□□□□ 0.22
RSPO3Q9BXY4 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
RSPO3Q9BXY4 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RSPO3Q9BXY4 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.45■□□□□ 0.22
RSPO3Q9BXY4 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.45■□□□□ 0.22
RSPO3Q9BXY4 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.45■□□□□ 0.22
RSPO3Q9BXY4 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.45■□□□□ 0.22
RSPO3Q9BXY4 AC140113.3-201ENST00000605663 199 ntBASIC16.45■□□□□ 0.22
RSPO3Q9BXY4 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RSPO3Q9BXY4 AC006011.2-201ENST00000621313 1158 ntBASIC16.45■□□□□ 0.22
RSPO3Q9BXY4 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.45■□□□□ 0.22
RSPO3Q9BXY4 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
RSPO3Q9BXY4 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.45■□□□□ 0.22
RSPO3Q9BXY4 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RSPO3Q9BXY4 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.45■□□□□ 0.22
RSPO3Q9BXY4 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RSPO3Q9BXY4 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.45■□□□□ 0.22
RSPO3Q9BXY4 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RSPO3Q9BXY4 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RSPO3Q9BXY4 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.45■□□□□ 0.22
RSPO3Q9BXY4 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RSPO3Q9BXY4 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
RSPO3Q9BXY4 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RSPO3Q9BXY4 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RSPO3Q9BXY4 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.44■□□□□ 0.22
RSPO3Q9BXY4 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.44■□□□□ 0.22
RSPO3Q9BXY4 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RSPO3Q9BXY4 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RSPO3Q9BXY4 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.44■□□□□ 0.22
RSPO3Q9BXY4 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.44■□□□□ 0.22
RSPO3Q9BXY4 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RSPO3Q9BXY4 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.44■□□□□ 0.22
RSPO3Q9BXY4 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RSPO3Q9BXY4 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RSPO3Q9BXY4 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RSPO3Q9BXY4 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RSPO3Q9BXY4 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RSPO3Q9BXY4 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.44■□□□□ 0.22
RSPO3Q9BXY4 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.44■□□□□ 0.22
RSPO3Q9BXY4 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RSPO3Q9BXY4 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.44■□□□□ 0.22
RSPO3Q9BXY4 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.44■□□□□ 0.22
RSPO3Q9BXY4 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.44■□□□□ 0.22
RSPO3Q9BXY4 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RSPO3Q9BXY4 AC008687.5-201ENST00000593746 558 ntBASIC16.44■□□□□ 0.22
RSPO3Q9BXY4 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.44■□□□□ 0.22
RSPO3Q9BXY4 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.44■□□□□ 0.22
RSPO3Q9BXY4 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RSPO3Q9BXY4 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RSPO3Q9BXY4 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.44■□□□□ 0.22
RSPO3Q9BXY4 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RSPO3Q9BXY4 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RSPO3Q9BXY4 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RSPO3Q9BXY4 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.44■□□□□ 0.22
RSPO3Q9BXY4 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.44■□□□□ 0.22
RSPO3Q9BXY4 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RSPO3Q9BXY4 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.44■□□□□ 0.22
RSPO3Q9BXY4 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RSPO3Q9BXY4 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
RSPO3Q9BXY4 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.44■□□□□ 0.22
RSPO3Q9BXY4 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RSPO3Q9BXY4 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.43■□□□□ 0.22
RSPO3Q9BXY4 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RSPO3Q9BXY4 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
RSPO3Q9BXY4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RSPO3Q9BXY4 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms