Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 AC063952.2-201ENST00000498792 1227 ntBASIC19.02■□□□□ 0.64
PCDHB18PQ96TA0 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.02■□□□□ 0.64
PCDHB18PQ96TA0 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.02■□□□□ 0.64
PCDHB18PQ96TA0 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDHB18PQ96TA0 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB18PQ96TA0 ZNF444P1-201ENST00000559497 298 ntBASIC19.02■□□□□ 0.64
PCDHB18PQ96TA0 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.02■□□□□ 0.64
PCDHB18PQ96TA0 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.02■□□□□ 0.64
PCDHB18PQ96TA0 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB18PQ96TA0 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB18PQ96TA0 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.02■□□□□ 0.64
PCDHB18PQ96TA0 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB18PQ96TA0 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB18PQ96TA0 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB18PQ96TA0 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PCDHB18PQ96TA0 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.02■□□□□ 0.63
PCDHB18PQ96TA0 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
PCDHB18PQ96TA0 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
PCDHB18PQ96TA0 REXO1L11P-201ENST00000620964 1927 ntBASIC19.02■□□□□ 0.63
PCDHB18PQ96TA0 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.02■□□□□ 0.63
PCDHB18PQ96TA0 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB18PQ96TA0 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB18PQ96TA0 LINC01311-201ENST00000565162 1445 ntBASIC19.01■□□□□ 0.63
PCDHB18PQ96TA0 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.01■□□□□ 0.63
PCDHB18PQ96TA0 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.01■□□□□ 0.63
PCDHB18PQ96TA0 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.01■□□□□ 0.63
PCDHB18PQ96TA0 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
PCDHB18PQ96TA0 AC083849.1-201ENST00000615227 514 ntBASIC19.01■□□□□ 0.63
PCDHB18PQ96TA0 AC009154.2-201ENST00000621177 724 ntBASIC19.01■□□□□ 0.63
PCDHB18PQ96TA0 AL353692.3-201ENST00000407031 1396 ntBASIC19.01■□□□□ 0.63
PCDHB18PQ96TA0 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB18PQ96TA0 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB18PQ96TA0 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHB18PQ96TA0 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB18PQ96TA0 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHB18PQ96TA0 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB18PQ96TA0 LINC00304-203ENST00000565008 1864 ntBASIC19.01■□□□□ 0.63
PCDHB18PQ96TA0 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB18PQ96TA0 AC108860.2-201ENST00000562760 2183 ntBASIC19■□□□□ 0.63
PCDHB18PQ96TA0 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19■□□□□ 0.63
PCDHB18PQ96TA0 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB18PQ96TA0 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PCDHB18PQ96TA0 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB18PQ96TA0 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHB18PQ96TA0 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PCDHB18PQ96TA0 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHB18PQ96TA0 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
PCDHB18PQ96TA0 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHB18PQ96TA0 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19■□□□□ 0.63
PCDHB18PQ96TA0 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19■□□□□ 0.63
PCDHB18PQ96TA0 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHB18PQ96TA0 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
PCDHB18PQ96TA0 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHB18PQ96TA0 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB18PQ96TA0 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19■□□□□ 0.63
PCDHB18PQ96TA0 TSPY12P-201ENST00000421279 868 ntBASIC19■□□□□ 0.63
PCDHB18PQ96TA0 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19■□□□□ 0.63
PCDHB18PQ96TA0 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19■□□□□ 0.63
PCDHB18PQ96TA0 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19■□□□□ 0.63
PCDHB18PQ96TA0 AC005332.3-201ENST00000589904 676 ntBASIC19■□□□□ 0.63
PCDHB18PQ96TA0 GXYLT1P4-201ENST00000613576 1192 ntBASIC19■□□□□ 0.63
PCDHB18PQ96TA0 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB18PQ96TA0 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHB18PQ96TA0 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHB18PQ96TA0 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19■□□□□ 0.63
PCDHB18PQ96TA0 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHB18PQ96TA0 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PCDHB18PQ96TA0 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB18PQ96TA0 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19■□□□□ 0.63
PCDHB18PQ96TA0 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PCDHB18PQ96TA0 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB18PQ96TA0 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB18PQ96TA0 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB18PQ96TA0 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDHB18PQ96TA0 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDHB18PQ96TA0 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB18PQ96TA0 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
PCDHB18PQ96TA0 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB18PQ96TA0 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB18PQ96TA0 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.99■□□□□ 0.63
PCDHB18PQ96TA0 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PCDHB18PQ96TA0 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB18PQ96TA0 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB18PQ96TA0 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PCDHB18PQ96TA0 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB18PQ96TA0 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.99■□□□□ 0.63
PCDHB18PQ96TA0 AC112698.1-201ENST00000510299 916 ntBASIC18.99■□□□□ 0.63
PCDHB18PQ96TA0 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDHB18PQ96TA0 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.99■□□□□ 0.63
PCDHB18PQ96TA0 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDHB18PQ96TA0 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB18PQ96TA0 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDHB18PQ96TA0 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDHB18PQ96TA0 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
PCDHB18PQ96TA0 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB18PQ96TA0 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB18PQ96TA0 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB18PQ96TA0 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB18PQ96TA0 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDHB18PQ96TA0 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms