Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.25■□□□□ 0.51
LRRC3BQ96PB8 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.25■□□□□ 0.51
LRRC3BQ96PB8 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.25■□□□□ 0.51
LRRC3BQ96PB8 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.25■□□□□ 0.51
LRRC3BQ96PB8 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.25■□□□□ 0.51
LRRC3BQ96PB8 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.25■□□□□ 0.51
LRRC3BQ96PB8 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.25■□□□□ 0.51
LRRC3BQ96PB8 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
LRRC3BQ96PB8 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.25■□□□□ 0.51
LRRC3BQ96PB8 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.25■□□□□ 0.51
LRRC3BQ96PB8 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.25■□□□□ 0.51
LRRC3BQ96PB8 AC040169.1-201ENST00000565382 521 ntBASIC18.25■□□□□ 0.51
LRRC3BQ96PB8 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.25■□□□□ 0.51
LRRC3BQ96PB8 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.25■□□□□ 0.51
LRRC3BQ96PB8 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC3BQ96PB8 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC3BQ96PB8 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.25■□□□□ 0.51
LRRC3BQ96PB8 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
LRRC3BQ96PB8 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
LRRC3BQ96PB8 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.25■□□□□ 0.51
LRRC3BQ96PB8 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC3BQ96PB8 AL353593.2-201ENST00000602529 1483 ntBASIC18.25■□□□□ 0.51
LRRC3BQ96PB8 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC3BQ96PB8 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.25■□□□□ 0.51
LRRC3BQ96PB8 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC3BQ96PB8 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.25■□□□□ 0.51
LRRC3BQ96PB8 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC3BQ96PB8 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC3BQ96PB8 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC3BQ96PB8 AC093677.2-201ENST00000600169 1863 ntBASIC18.24■□□□□ 0.51
LRRC3BQ96PB8 AC100803.2-201ENST00000562459 1963 ntBASIC18.24■□□□□ 0.51
LRRC3BQ96PB8 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.24■□□□□ 0.51
LRRC3BQ96PB8 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC3BQ96PB8 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
LRRC3BQ96PB8 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
LRRC3BQ96PB8 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
LRRC3BQ96PB8 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.24■□□□□ 0.51
LRRC3BQ96PB8 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
LRRC3BQ96PB8 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC3BQ96PB8 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.24■□□□□ 0.51
LRRC3BQ96PB8 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.24■□□□□ 0.51
LRRC3BQ96PB8 AC006557.2-201ENST00000592985 1240 ntBASIC18.24■□□□□ 0.51
LRRC3BQ96PB8 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.24■□□□□ 0.51
LRRC3BQ96PB8 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.24■□□□□ 0.51
LRRC3BQ96PB8 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC3BQ96PB8 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.24■□□□□ 0.51
LRRC3BQ96PB8 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC3BQ96PB8 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC3BQ96PB8 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC3BQ96PB8 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.24■□□□□ 0.51
LRRC3BQ96PB8 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC3BQ96PB8 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.24■□□□□ 0.51
LRRC3BQ96PB8 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC3BQ96PB8 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC3BQ96PB8 AC022898.2-201ENST00000616822 1312 ntBASIC18.23■□□□□ 0.51
LRRC3BQ96PB8 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC3BQ96PB8 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC3BQ96PB8 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC3BQ96PB8 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.23■□□□□ 0.51
LRRC3BQ96PB8 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC3BQ96PB8 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.23■□□□□ 0.51
LRRC3BQ96PB8 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC3BQ96PB8 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC3BQ96PB8 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC3BQ96PB8 AC006504.4-201ENST00000592118 1568 ntBASIC18.23■□□□□ 0.51
LRRC3BQ96PB8 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC3BQ96PB8 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC3BQ96PB8 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC3BQ96PB8 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.23■□□□□ 0.51
LRRC3BQ96PB8 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC3BQ96PB8 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC3BQ96PB8 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.23■□□□□ 0.51
LRRC3BQ96PB8 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.23■□□□□ 0.51
LRRC3BQ96PB8 RNA5SP416-201ENST00000516838 111 ntBASIC18.23■□□□□ 0.51
LRRC3BQ96PB8 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.23■□□□□ 0.51
LRRC3BQ96PB8 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.23■□□□□ 0.51
LRRC3BQ96PB8 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
LRRC3BQ96PB8 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC3BQ96PB8 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC3BQ96PB8 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.23■□□□□ 0.51
LRRC3BQ96PB8 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC3BQ96PB8 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC3BQ96PB8 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC3BQ96PB8 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC3BQ96PB8 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.23■□□□□ 0.51
LRRC3BQ96PB8 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC3BQ96PB8 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC3BQ96PB8 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
LRRC3BQ96PB8 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC3BQ96PB8 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.22■□□□□ 0.51
LRRC3BQ96PB8 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.22■□□□□ 0.51
LRRC3BQ96PB8 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC3BQ96PB8 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC3BQ96PB8 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC3BQ96PB8 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
LRRC3BQ96PB8 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC3BQ96PB8 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC3BQ96PB8 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
LRRC3BQ96PB8 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
LRRC3BQ96PB8 AC004832.2-201ENST00000426397 482 ntBASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms