Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RPGRIP1Q96KN7 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPGRIP1Q96KN7 AC135776.1-201ENST00000319817 2481 ntBASIC19.79■□□□□ 0.76
RPGRIP1Q96KN7 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPGRIP1Q96KN7 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.79■□□□□ 0.76
RPGRIP1Q96KN7 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPGRIP1Q96KN7 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RPGRIP1Q96KN7 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.79■□□□□ 0.76
RPGRIP1Q96KN7 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
RPGRIP1Q96KN7 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RPGRIP1Q96KN7 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPGRIP1Q96KN7 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
RPGRIP1Q96KN7 CHCHD2P8-201ENST00000429873 447 ntBASIC19.79■□□□□ 0.76
RPGRIP1Q96KN7 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPGRIP1Q96KN7 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.79■□□□□ 0.76
RPGRIP1Q96KN7 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPGRIP1Q96KN7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPGRIP1Q96KN7 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RPGRIP1Q96KN7 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RPGRIP1Q96KN7 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPGRIP1Q96KN7 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.79■□□□□ 0.76
RPGRIP1Q96KN7 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPGRIP1Q96KN7 AC138028.4-201ENST00000564984 1845 ntBASIC19.79■□□□□ 0.76
RPGRIP1Q96KN7 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPGRIP1Q96KN7 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RPGRIP1Q96KN7 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPGRIP1Q96KN7 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.78■□□□□ 0.76
RPGRIP1Q96KN7 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RPGRIP1Q96KN7 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPGRIP1Q96KN7 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
RPGRIP1Q96KN7 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPGRIP1Q96KN7 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RPGRIP1Q96KN7 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.78■□□□□ 0.76
RPGRIP1Q96KN7 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPGRIP1Q96KN7 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.78■□□□□ 0.76
RPGRIP1Q96KN7 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPGRIP1Q96KN7 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RPGRIP1Q96KN7 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.78■□□□□ 0.76
RPGRIP1Q96KN7 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RPGRIP1Q96KN7 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.78■□□□□ 0.76
RPGRIP1Q96KN7 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPGRIP1Q96KN7 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPGRIP1Q96KN7 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPGRIP1Q96KN7 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.78■□□□□ 0.76
RPGRIP1Q96KN7 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
RPGRIP1Q96KN7 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPGRIP1Q96KN7 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
RPGRIP1Q96KN7 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RPGRIP1Q96KN7 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.77■□□□□ 0.76
RPGRIP1Q96KN7 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
RPGRIP1Q96KN7 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPGRIP1Q96KN7 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
RPGRIP1Q96KN7 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPGRIP1Q96KN7 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPGRIP1Q96KN7 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPGRIP1Q96KN7 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.77■□□□□ 0.76
RPGRIP1Q96KN7 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPGRIP1Q96KN7 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.77■□□□□ 0.76
RPGRIP1Q96KN7 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
RPGRIP1Q96KN7 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.77■□□□□ 0.76
RPGRIP1Q96KN7 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.77■□□□□ 0.76
RPGRIP1Q96KN7 LINC00265-3P-201ENST00000447588 903 ntBASIC19.77■□□□□ 0.76
RPGRIP1Q96KN7 FOSL1P1-201ENST00000511041 816 ntBASIC19.77■□□□□ 0.76
RPGRIP1Q96KN7 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.77■□□□□ 0.76
RPGRIP1Q96KN7 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.77■□□□□ 0.76
RPGRIP1Q96KN7 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
RPGRIP1Q96KN7 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPGRIP1Q96KN7 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
RPGRIP1Q96KN7 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPGRIP1Q96KN7 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPGRIP1Q96KN7 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RPGRIP1Q96KN7 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.77■□□□□ 0.76
RPGRIP1Q96KN7 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RPGRIP1Q96KN7 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPGRIP1Q96KN7 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPGRIP1Q96KN7 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RPGRIP1Q96KN7 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPGRIP1Q96KN7 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPGRIP1Q96KN7 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RPGRIP1Q96KN7 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RPGRIP1Q96KN7 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
RPGRIP1Q96KN7 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
RPGRIP1Q96KN7 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.76■□□□□ 0.75
RPGRIP1Q96KN7 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RPGRIP1Q96KN7 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.76■□□□□ 0.75
RPGRIP1Q96KN7 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPGRIP1Q96KN7 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPGRIP1Q96KN7 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RPGRIP1Q96KN7 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPGRIP1Q96KN7 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPGRIP1Q96KN7 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RPGRIP1Q96KN7 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPGRIP1Q96KN7 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPGRIP1Q96KN7 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.76■□□□□ 0.75
RPGRIP1Q96KN7 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RPGRIP1Q96KN7 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.76■□□□□ 0.75
RPGRIP1Q96KN7 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
RPGRIP1Q96KN7 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RPGRIP1Q96KN7 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RPGRIP1Q96KN7 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms