Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.09■□□□□ 0.49
CHMP6Q96FZ7 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.09■□□□□ 0.49
CHMP6Q96FZ7 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CHMP6Q96FZ7 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CHMP6Q96FZ7 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP6Q96FZ7 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP6Q96FZ7 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP6Q96FZ7 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CHMP6Q96FZ7 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP6Q96FZ7 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.09■□□□□ 0.49
CHMP6Q96FZ7 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.09■□□□□ 0.49
CHMP6Q96FZ7 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.09■□□□□ 0.49
CHMP6Q96FZ7 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CHMP6Q96FZ7 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP6Q96FZ7 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP6Q96FZ7 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CHMP6Q96FZ7 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.09■□□□□ 0.49
CHMP6Q96FZ7 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CHMP6Q96FZ7 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.09■□□□□ 0.49
CHMP6Q96FZ7 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP6Q96FZ7 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.09■□□□□ 0.49
CHMP6Q96FZ7 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.09■□□□□ 0.49
CHMP6Q96FZ7 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP6Q96FZ7 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
CHMP6Q96FZ7 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.09■□□□□ 0.49
CHMP6Q96FZ7 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP6Q96FZ7 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP6Q96FZ7 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.09■□□□□ 0.49
CHMP6Q96FZ7 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHMP6Q96FZ7 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHMP6Q96FZ7 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHMP6Q96FZ7 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHMP6Q96FZ7 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHMP6Q96FZ7 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CHMP6Q96FZ7 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.08■□□□□ 0.49
CHMP6Q96FZ7 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHMP6Q96FZ7 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHMP6Q96FZ7 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.08■□□□□ 0.49
CHMP6Q96FZ7 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.08■□□□□ 0.49
CHMP6Q96FZ7 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHMP6Q96FZ7 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHMP6Q96FZ7 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
CHMP6Q96FZ7 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.08■□□□□ 0.48
CHMP6Q96FZ7 AC026366.1-201ENST00000488803 879 ntBASIC18.08■□□□□ 0.48
CHMP6Q96FZ7 PRSS44-201ENST00000515154 1146 ntBASIC18.08■□□□□ 0.48
CHMP6Q96FZ7 C1QL1P1-201ENST00000568105 661 ntBASIC18.08■□□□□ 0.48
CHMP6Q96FZ7 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.08■□□□□ 0.48
CHMP6Q96FZ7 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.08■□□□□ 0.48
CHMP6Q96FZ7 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.08■□□□□ 0.48
CHMP6Q96FZ7 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHMP6Q96FZ7 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHMP6Q96FZ7 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.08■□□□□ 0.48
CHMP6Q96FZ7 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHMP6Q96FZ7 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CHMP6Q96FZ7 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHMP6Q96FZ7 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CHMP6Q96FZ7 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
CHMP6Q96FZ7 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHMP6Q96FZ7 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.08■□□□□ 0.48
CHMP6Q96FZ7 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHMP6Q96FZ7 FLJ38576-201ENST00000623820 2459 ntBASIC18.08■□□□□ 0.48
CHMP6Q96FZ7 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHMP6Q96FZ7 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHMP6Q96FZ7 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHMP6Q96FZ7 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CHMP6Q96FZ7 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.07■□□□□ 0.48
CHMP6Q96FZ7 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP6Q96FZ7 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP6Q96FZ7 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP6Q96FZ7 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.07■□□□□ 0.48
CHMP6Q96FZ7 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP6Q96FZ7 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.07■□□□□ 0.48
CHMP6Q96FZ7 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.07■□□□□ 0.48
CHMP6Q96FZ7 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP6Q96FZ7 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP6Q96FZ7 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CHMP6Q96FZ7 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP6Q96FZ7 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP6Q96FZ7 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP6Q96FZ7 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.07■□□□□ 0.48
CHMP6Q96FZ7 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.07■□□□□ 0.48
CHMP6Q96FZ7 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CHMP6Q96FZ7 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.07■□□□□ 0.48
CHMP6Q96FZ7 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP6Q96FZ7 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.07■□□□□ 0.48
CHMP6Q96FZ7 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.07■□□□□ 0.48
CHMP6Q96FZ7 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP6Q96FZ7 AC008403.3-201ENST00000598924 454 ntBASIC18.07■□□□□ 0.48
CHMP6Q96FZ7 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP6Q96FZ7 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP6Q96FZ7 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.07■□□□□ 0.48
CHMP6Q96FZ7 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP6Q96FZ7 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP6Q96FZ7 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP6Q96FZ7 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.07■□□□□ 0.48
CHMP6Q96FZ7 NBPF21P-201ENST00000425093 1451 ntBASIC18.07■□□□□ 0.48
CHMP6Q96FZ7 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.07■□□□□ 0.48
CHMP6Q96FZ7 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP6Q96FZ7 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.07■□□□□ 0.48
CHMP6Q96FZ7 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms