Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HPS3Q969F9 PP12613-201ENST00000424958 2230 ntBASIC19.88■□□□□ 0.77
HPS3Q969F9 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
HPS3Q969F9 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.88■□□□□ 0.77
HPS3Q969F9 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HPS3Q969F9 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HPS3Q969F9 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HPS3Q969F9 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.88■□□□□ 0.77
HPS3Q969F9 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.88■□□□□ 0.77
HPS3Q969F9 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HPS3Q969F9 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.88■□□□□ 0.77
HPS3Q969F9 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HPS3Q969F9 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HPS3Q969F9 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
HPS3Q969F9 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HPS3Q969F9 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HPS3Q969F9 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HPS3Q969F9 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.88■□□□□ 0.77
HPS3Q969F9 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.88■□□□□ 0.77
HPS3Q969F9 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HPS3Q969F9 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HPS3Q969F9 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HPS3Q969F9 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.88■□□□□ 0.77
HPS3Q969F9 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.88■□□□□ 0.77
HPS3Q969F9 GPR32P1-201ENST00000601788 811 ntBASIC19.88■□□□□ 0.77
HPS3Q969F9 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.88■□□□□ 0.77
HPS3Q969F9 AC106820.2-201ENST00000563775 3264 ntBASIC19.88■□□□□ 0.77
HPS3Q969F9 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
HPS3Q969F9 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
HPS3Q969F9 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HPS3Q969F9 AC009949.1-201ENST00000623048 1830 ntBASIC19.88■□□□□ 0.77
HPS3Q969F9 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HPS3Q969F9 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.88■□□□□ 0.77
HPS3Q969F9 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
HPS3Q969F9 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HPS3Q969F9 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HPS3Q969F9 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HPS3Q969F9 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HPS3Q969F9 KRT18P65-201ENST00000439811 1286 ntBASIC19.87■□□□□ 0.77
HPS3Q969F9 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.87■□□□□ 0.77
HPS3Q969F9 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.87■□□□□ 0.77
HPS3Q969F9 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.87■□□□□ 0.77
HPS3Q969F9 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.87■□□□□ 0.77
HPS3Q969F9 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HPS3Q969F9 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
HPS3Q969F9 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HPS3Q969F9 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.87■□□□□ 0.77
HPS3Q969F9 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
HPS3Q969F9 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
HPS3Q969F9 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
HPS3Q969F9 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.87■□□□□ 0.77
HPS3Q969F9 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HPS3Q969F9 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.87■□□□□ 0.77
HPS3Q969F9 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HPS3Q969F9 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
HPS3Q969F9 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
HPS3Q969F9 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.86■□□□□ 0.77
HPS3Q969F9 AL355312.1-201ENST00000407115 2176 ntBASIC19.86■□□□□ 0.77
HPS3Q969F9 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HPS3Q969F9 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.86■□□□□ 0.77
HPS3Q969F9 AL645929.1-201ENST00000420084 975 ntBASIC19.86■□□□□ 0.77
HPS3Q969F9 TSPY12P-201ENST00000421279 868 ntBASIC19.86■□□□□ 0.77
HPS3Q969F9 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.86■□□□□ 0.77
HPS3Q969F9 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.86■□□□□ 0.77
HPS3Q969F9 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.86■□□□□ 0.77
HPS3Q969F9 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HPS3Q969F9 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HPS3Q969F9 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HPS3Q969F9 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
HPS3Q969F9 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HPS3Q969F9 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
HPS3Q969F9 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HPS3Q969F9 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HPS3Q969F9 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HPS3Q969F9 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
HPS3Q969F9 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HPS3Q969F9 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
HPS3Q969F9 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.85■□□□□ 0.77
HPS3Q969F9 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HPS3Q969F9 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HPS3Q969F9 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HPS3Q969F9 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.85■□□□□ 0.77
HPS3Q969F9 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.85■□□□□ 0.77
HPS3Q969F9 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HPS3Q969F9 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
HPS3Q969F9 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HPS3Q969F9 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
HPS3Q969F9 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
HPS3Q969F9 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HPS3Q969F9 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HPS3Q969F9 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
HPS3Q969F9 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HPS3Q969F9 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HPS3Q969F9 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.85■□□□□ 0.77
HPS3Q969F9 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
HPS3Q969F9 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.84■□□□□ 0.77
HPS3Q969F9 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HPS3Q969F9 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
HPS3Q969F9 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
HPS3Q969F9 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms