Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP6V0A1Q93050 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP6V0A1Q93050 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP6V0A1Q93050 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP6V0A1Q93050 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP6V0A1Q93050 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP6V0A1Q93050 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP6V0A1Q93050 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.03■□□□□ 0.8
ATP6V0A1Q93050 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ATP6V0A1Q93050 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP6V0A1Q93050 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.03■□□□□ 0.8
ATP6V0A1Q93050 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP6V0A1Q93050 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.03■□□□□ 0.8
ATP6V0A1Q93050 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP6V0A1Q93050 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.03■□□□□ 0.8
ATP6V0A1Q93050 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP6V0A1Q93050 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ATP6V0A1Q93050 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP6V0A1Q93050 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.03■□□□□ 0.8
ATP6V0A1Q93050 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.03■□□□□ 0.8
ATP6V0A1Q93050 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.03■□□□□ 0.8
ATP6V0A1Q93050 AC104581.1-202ENST00000635932 2618 ntBASIC20.03■□□□□ 0.8
ATP6V0A1Q93050 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP6V0A1Q93050 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.03■□□□□ 0.8
ATP6V0A1Q93050 IL9RP2-201ENST00000423948 1312 ntBASIC20.02■□□□□ 0.8
ATP6V0A1Q93050 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.02■□□□□ 0.8
ATP6V0A1Q93050 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP6V0A1Q93050 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP6V0A1Q93050 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.02■□□□□ 0.8
ATP6V0A1Q93050 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP6V0A1Q93050 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP6V0A1Q93050 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.02■□□□□ 0.8
ATP6V0A1Q93050 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ATP6V0A1Q93050 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP6V0A1Q93050 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP6V0A1Q93050 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP6V0A1Q93050 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP6V0A1Q93050 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.02■□□□□ 0.8
ATP6V0A1Q93050 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.02■□□□□ 0.8
ATP6V0A1Q93050 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ATP6V0A1Q93050 AL031284.1-201ENST00000419297 478 ntBASIC20.02■□□□□ 0.8
ATP6V0A1Q93050 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.02■□□□□ 0.8
ATP6V0A1Q93050 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.02■□□□□ 0.8
ATP6V0A1Q93050 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.02■□□□□ 0.8
ATP6V0A1Q93050 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.02■□□□□ 0.8
ATP6V0A1Q93050 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.02■□□□□ 0.8
ATP6V0A1Q93050 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.02■□□□□ 0.8
ATP6V0A1Q93050 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.02■□□□□ 0.8
ATP6V0A1Q93050 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.02■□□□□ 0.8
ATP6V0A1Q93050 AC148477.8-201ENST00000624298 468 ntBASIC20.02■□□□□ 0.8
ATP6V0A1Q93050 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
ATP6V0A1Q93050 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.02■□□□□ 0.8
ATP6V0A1Q93050 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP6V0A1Q93050 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
ATP6V0A1Q93050 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP6V0A1Q93050 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ATP6V0A1Q93050 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP6V0A1Q93050 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.02■□□□□ 0.8
ATP6V0A1Q93050 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ATP6V0A1Q93050 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ATP6V0A1Q93050 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ATP6V0A1Q93050 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
ATP6V0A1Q93050 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ATP6V0A1Q93050 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ATP6V0A1Q93050 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.79
ATP6V0A1Q93050 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.02■□□□□ 0.79
ATP6V0A1Q93050 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
ATP6V0A1Q93050 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.02■□□□□ 0.79
ATP6V0A1Q93050 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ATP6V0A1Q93050 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP6V0A1Q93050 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP6V0A1Q93050 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP6V0A1Q93050 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ATP6V0A1Q93050 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
ATP6V0A1Q93050 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.01■□□□□ 0.79
ATP6V0A1Q93050 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
ATP6V0A1Q93050 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.01■□□□□ 0.79
ATP6V0A1Q93050 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP6V0A1Q93050 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.01■□□□□ 0.79
ATP6V0A1Q93050 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.01■□□□□ 0.79
ATP6V0A1Q93050 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.01■□□□□ 0.79
ATP6V0A1Q93050 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP6V0A1Q93050 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.01■□□□□ 0.79
ATP6V0A1Q93050 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.01■□□□□ 0.79
ATP6V0A1Q93050 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.01■□□□□ 0.79
ATP6V0A1Q93050 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP6V0A1Q93050 AL355877.3-201ENST00000622820 899 ntBASIC20.01■□□□□ 0.79
ATP6V0A1Q93050 AF228730.7-201ENST00000641842 219 ntBASIC20.01■□□□□ 0.79
ATP6V0A1Q93050 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ATP6V0A1Q93050 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
ATP6V0A1Q93050 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.01■□□□□ 0.79
ATP6V0A1Q93050 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP6V0A1Q93050 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.01■□□□□ 0.79
ATP6V0A1Q93050 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.01■□□□□ 0.79
ATP6V0A1Q93050 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP6V0A1Q93050 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP6V0A1Q93050 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ATP6V0A1Q93050 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20■□□□□ 0.79
ATP6V0A1Q93050 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20■□□□□ 0.79
ATP6V0A1Q93050 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms