Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AL020989.1-201ENST00000422979 469 ntBASIC21.69■■□□□ 1.06
SNED1Q8TER0 POLD4-207ENST00000531239 584 ntTSL 2 BASIC21.69■■□□□ 1.06
SNED1Q8TER0 CFL1-212ENST00000531413 636 ntTSL 3 BASIC21.69■■□□□ 1.06
SNED1Q8TER0 MAL2-202ENST00000531508 892 ntTSL 3 BASIC21.69■■□□□ 1.06
SNED1Q8TER0 OR7E47P-204ENST00000575924 449 ntBASIC21.69■■□□□ 1.06
SNED1Q8TER0 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC21.69■■□□□ 1.06
SNED1Q8TER0 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNED1Q8TER0 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNED1Q8TER0 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SNED1Q8TER0 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
SNED1Q8TER0 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
SNED1Q8TER0 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
SNED1Q8TER0 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC21.68■■□□□ 1.06
SNED1Q8TER0 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SNED1Q8TER0 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.68■■□□□ 1.06
SNED1Q8TER0 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SNED1Q8TER0 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC21.68■■□□□ 1.06
SNED1Q8TER0 PNMT-202ENST00000394246 821 ntTSL 2 BASIC21.68■■□□□ 1.06
SNED1Q8TER0 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
SNED1Q8TER0 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SNED1Q8TER0 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SNED1Q8TER0 SPCS2P1-201ENST00000561636 679 ntBASIC21.68■■□□□ 1.06
SNED1Q8TER0 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC21.68■■□□□ 1.06
SNED1Q8TER0 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
SNED1Q8TER0 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
SNED1Q8TER0 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SNED1Q8TER0 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC21.68■■□□□ 1.06
SNED1Q8TER0 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SNED1Q8TER0 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SNED1Q8TER0 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SNED1Q8TER0 ESPNP-201ENST00000270691 2015 ntBASIC21.68■■□□□ 1.06
SNED1Q8TER0 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
SNED1Q8TER0 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
SNED1Q8TER0 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.67■■□□□ 1.06
SNED1Q8TER0 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNED1Q8TER0 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
SNED1Q8TER0 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNED1Q8TER0 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SNED1Q8TER0 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC21.67■■□□□ 1.06
SNED1Q8TER0 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNED1Q8TER0 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
SNED1Q8TER0 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC21.67■■□□□ 1.06
SNED1Q8TER0 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SNED1Q8TER0 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNED1Q8TER0 AL139400.1-201ENST00000366220 510 ntBASIC21.67■■□□□ 1.06
SNED1Q8TER0 COX5BP2-201ENST00000392354 334 ntBASIC21.67■■□□□ 1.06
SNED1Q8TER0 AL035633.1-201ENST00000406139 838 ntBASIC21.67■■□□□ 1.06
SNED1Q8TER0 AC103564.2-201ENST00000432853 1299 ntBASIC21.67■■□□□ 1.06
SNED1Q8TER0 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC21.67■■□□□ 1.06
SNED1Q8TER0 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC21.67■■□□□ 1.06
SNED1Q8TER0 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
SNED1Q8TER0 AC019129.2-201ENST00000609837 1235 ntBASIC21.67■■□□□ 1.06
SNED1Q8TER0 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
SNED1Q8TER0 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNED1Q8TER0 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNED1Q8TER0 GID4-202ENST00000376345 1391 ntTSL 3 BASIC21.66■■□□□ 1.06
SNED1Q8TER0 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.66■■□□□ 1.06
SNED1Q8TER0 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SNED1Q8TER0 CD82-202ENST00000342935 967 ntTSL 5 BASIC21.66■■□□□ 1.06
SNED1Q8TER0 STOM-202ENST00000347359 870 ntTSL 2 BASIC21.66■■□□□ 1.06
SNED1Q8TER0 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC21.66■■□□□ 1.06
SNED1Q8TER0 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SNED1Q8TER0 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC21.66■■□□□ 1.06
SNED1Q8TER0 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC21.66■■□□□ 1.06
SNED1Q8TER0 AC010654.1-201ENST00000615722 808 ntBASIC21.66■■□□□ 1.06
SNED1Q8TER0 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNED1Q8TER0 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC21.66■■□□□ 1.06
SNED1Q8TER0 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
SNED1Q8TER0 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNED1Q8TER0 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC21.66■■□□□ 1.06
SNED1Q8TER0 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNED1Q8TER0 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC21.66■■□□□ 1.06
SNED1Q8TER0 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNED1Q8TER0 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNED1Q8TER0 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.65■■□□□ 1.06
SNED1Q8TER0 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
SNED1Q8TER0 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNED1Q8TER0 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SNED1Q8TER0 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNED1Q8TER0 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNED1Q8TER0 METTL26-205ENST00000397666 726 ntTSL 2 BASIC21.65■■□□□ 1.06
SNED1Q8TER0 FAM8A3P-201ENST00000427218 844 ntBASIC21.65■■□□□ 1.06
SNED1Q8TER0 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC21.65■■□□□ 1.06
SNED1Q8TER0 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC21.65■■□□□ 1.06
SNED1Q8TER0 AC004790.2-201ENST00000623588 572 ntBASIC21.65■■□□□ 1.06
SNED1Q8TER0 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC21.65■■□□□ 1.06
SNED1Q8TER0 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SNED1Q8TER0 GMCL1P1-201ENST00000463439 1581 ntBASIC21.65■■□□□ 1.06
SNED1Q8TER0 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNED1Q8TER0 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC21.65■■□□□ 1.06
SNED1Q8TER0 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
SNED1Q8TER0 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.06
SNED1Q8TER0 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SNED1Q8TER0 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
SNED1Q8TER0 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC21.64■■□□□ 1.06
SNED1Q8TER0 RNF34-208ENST00000555076 593 ntTSL 3 BASIC21.64■■□□□ 1.06
SNED1Q8TER0 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC21.64■■□□□ 1.06
SNED1Q8TER0 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC21.64■■□□□ 1.06
SNED1Q8TER0 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC21.64■■□□□ 1.06
SNED1Q8TER0 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms