Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTL3Q8N8U3 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.39■□□□□ 0.53
RTL3Q8N8U3 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RTL3Q8N8U3 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RTL3Q8N8U3 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTL3Q8N8U3 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTL3Q8N8U3 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTL3Q8N8U3 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTL3Q8N8U3 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTL3Q8N8U3 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTL3Q8N8U3 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RTL3Q8N8U3 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTL3Q8N8U3 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTL3Q8N8U3 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTL3Q8N8U3 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTL3Q8N8U3 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTL3Q8N8U3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RTL3Q8N8U3 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTL3Q8N8U3 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTL3Q8N8U3 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
RTL3Q8N8U3 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.38■□□□□ 0.53
RTL3Q8N8U3 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
RTL3Q8N8U3 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTL3Q8N8U3 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RTL3Q8N8U3 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTL3Q8N8U3 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTL3Q8N8U3 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
RTL3Q8N8U3 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTL3Q8N8U3 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.38■□□□□ 0.53
RTL3Q8N8U3 VENTXP7-201ENST00000475503 772 ntBASIC18.38■□□□□ 0.53
RTL3Q8N8U3 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.38■□□□□ 0.53
RTL3Q8N8U3 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.38■□□□□ 0.53
RTL3Q8N8U3 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.38■□□□□ 0.53
RTL3Q8N8U3 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RTL3Q8N8U3 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
RTL3Q8N8U3 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.38■□□□□ 0.53
RTL3Q8N8U3 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
RTL3Q8N8U3 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.38■□□□□ 0.53
RTL3Q8N8U3 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.38■□□□□ 0.53
RTL3Q8N8U3 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTL3Q8N8U3 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RTL3Q8N8U3 AC092119.3-201ENST00000612618 583 ntBASIC18.38■□□□□ 0.53
RTL3Q8N8U3 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.38■□□□□ 0.53
RTL3Q8N8U3 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.38■□□□□ 0.53
RTL3Q8N8U3 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.38■□□□□ 0.53
RTL3Q8N8U3 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.38■□□□□ 0.53
RTL3Q8N8U3 AC233702.3-201ENST00000578656 1387 ntBASIC18.38■□□□□ 0.53
RTL3Q8N8U3 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTL3Q8N8U3 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RTL3Q8N8U3 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.38■□□□□ 0.53
RTL3Q8N8U3 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RTL3Q8N8U3 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.38■□□□□ 0.53
RTL3Q8N8U3 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.38■□□□□ 0.53
RTL3Q8N8U3 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTL3Q8N8U3 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTL3Q8N8U3 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RTL3Q8N8U3 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.37■□□□□ 0.53
RTL3Q8N8U3 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RTL3Q8N8U3 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RTL3Q8N8U3 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTL3Q8N8U3 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RTL3Q8N8U3 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTL3Q8N8U3 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.37■□□□□ 0.53
RTL3Q8N8U3 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.37■□□□□ 0.53
RTL3Q8N8U3 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTL3Q8N8U3 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
RTL3Q8N8U3 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RTL3Q8N8U3 TOB2P1-201ENST00000469761 992 ntBASIC18.37■□□□□ 0.53
RTL3Q8N8U3 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.37■□□□□ 0.53
RTL3Q8N8U3 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTL3Q8N8U3 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.37■□□□□ 0.53
RTL3Q8N8U3 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
RTL3Q8N8U3 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RTL3Q8N8U3 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
RTL3Q8N8U3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RTL3Q8N8U3 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RTL3Q8N8U3 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RTL3Q8N8U3 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.37■□□□□ 0.53
RTL3Q8N8U3 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTL3Q8N8U3 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
RTL3Q8N8U3 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RTL3Q8N8U3 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RTL3Q8N8U3 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.37■□□□□ 0.53
RTL3Q8N8U3 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.37■□□□□ 0.53
RTL3Q8N8U3 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.36■□□□□ 0.53
RTL3Q8N8U3 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
RTL3Q8N8U3 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTL3Q8N8U3 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTL3Q8N8U3 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTL3Q8N8U3 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTL3Q8N8U3 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTL3Q8N8U3 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.36■□□□□ 0.53
RTL3Q8N8U3 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTL3Q8N8U3 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RTL3Q8N8U3 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTL3Q8N8U3 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RTL3Q8N8U3 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RTL3Q8N8U3 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RTL3Q8N8U3 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.36■□□□□ 0.53
RTL3Q8N8U3 LINC00265-3P-201ENST00000447588 903 ntBASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms