Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CCDC33Q8N5R6 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CCDC33Q8N5R6 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC33Q8N5R6 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC33Q8N5R6 AL096828.2-201ENST00000567259 1965 ntBASIC18.84■□□□□ 0.61
CCDC33Q8N5R6 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC33Q8N5R6 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC33Q8N5R6 AC067852.2-201ENST00000590513 2313 ntBASIC18.84■□□□□ 0.61
CCDC33Q8N5R6 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC33Q8N5R6 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC33Q8N5R6 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC33Q8N5R6 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC33Q8N5R6 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC33Q8N5R6 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
CCDC33Q8N5R6 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC33Q8N5R6 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.83■□□□□ 0.61
CCDC33Q8N5R6 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CCDC33Q8N5R6 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC33Q8N5R6 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC33Q8N5R6 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.83■□□□□ 0.61
CCDC33Q8N5R6 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC33Q8N5R6 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC33Q8N5R6 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC33Q8N5R6 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC33Q8N5R6 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC33Q8N5R6 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC33Q8N5R6 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC33Q8N5R6 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC33Q8N5R6 EMBP1-201ENST00000458200 901 ntBASIC18.83■□□□□ 0.6
CCDC33Q8N5R6 FOSL1P1-201ENST00000511041 816 ntBASIC18.83■□□□□ 0.6
CCDC33Q8N5R6 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC33Q8N5R6 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.83■□□□□ 0.6
CCDC33Q8N5R6 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC33Q8N5R6 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.83■□□□□ 0.6
CCDC33Q8N5R6 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC33Q8N5R6 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC33Q8N5R6 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CCDC33Q8N5R6 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.83■□□□□ 0.6
CCDC33Q8N5R6 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC33Q8N5R6 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CCDC33Q8N5R6 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC33Q8N5R6 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC33Q8N5R6 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CCDC33Q8N5R6 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CCDC33Q8N5R6 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC33Q8N5R6 KRT8P10-201ENST00000450021 1447 ntBASIC18.83■□□□□ 0.6
CCDC33Q8N5R6 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC33Q8N5R6 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC33Q8N5R6 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC33Q8N5R6 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC33Q8N5R6 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC33Q8N5R6 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC33Q8N5R6 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC33Q8N5R6 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC33Q8N5R6 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC33Q8N5R6 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC33Q8N5R6 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC33Q8N5R6 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC33Q8N5R6 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
CCDC33Q8N5R6 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC33Q8N5R6 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC33Q8N5R6 FAAHP1-202ENST00000446499 1238 ntBASIC18.82■□□□□ 0.6
CCDC33Q8N5R6 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC33Q8N5R6 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.82■□□□□ 0.6
CCDC33Q8N5R6 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CCDC33Q8N5R6 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CCDC33Q8N5R6 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC33Q8N5R6 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC33Q8N5R6 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
CCDC33Q8N5R6 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC33Q8N5R6 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC33Q8N5R6 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC33Q8N5R6 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CCDC33Q8N5R6 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC33Q8N5R6 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC33Q8N5R6 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
CCDC33Q8N5R6 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC33Q8N5R6 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC33Q8N5R6 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CCDC33Q8N5R6 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC33Q8N5R6 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC33Q8N5R6 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC33Q8N5R6 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC33Q8N5R6 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC33Q8N5R6 TSPY19P-201ENST00000418461 509 ntBASIC18.81■□□□□ 0.6
CCDC33Q8N5R6 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC33Q8N5R6 TSPY18P-201ENST00000441642 509 ntBASIC18.81■□□□□ 0.6
CCDC33Q8N5R6 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC33Q8N5R6 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC33Q8N5R6 AC091304.2-201ENST00000564639 760 ntBASIC18.81■□□□□ 0.6
CCDC33Q8N5R6 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC33Q8N5R6 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC33Q8N5R6 IGHV3-41-201ENST00000613121 348 ntBASIC18.81■□□□□ 0.6
CCDC33Q8N5R6 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC33Q8N5R6 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC33Q8N5R6 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CCDC33Q8N5R6 AL024508.2-201ENST00000607749 1894 ntBASIC18.81■□□□□ 0.6
CCDC33Q8N5R6 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC33Q8N5R6 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC33Q8N5R6 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms