Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SLX4Q8IY92 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLX4Q8IY92 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
SLX4Q8IY92 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC21.69■■□□□ 1.06
SLX4Q8IY92 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SLX4Q8IY92 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC21.69■■□□□ 1.06
SLX4Q8IY92 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC21.69■■□□□ 1.06
SLX4Q8IY92 LSM12-202ENST00000585388 942 ntTSL 3 BASIC21.69■■□□□ 1.06
SLX4Q8IY92 AQP6-205ENST00000618286 829 ntTSL 5 BASIC21.69■■□□□ 1.06
SLX4Q8IY92 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLX4Q8IY92 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLX4Q8IY92 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC21.69■■□□□ 1.06
SLX4Q8IY92 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC21.69■■□□□ 1.06
SLX4Q8IY92 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC21.69■■□□□ 1.06
SLX4Q8IY92 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SLX4Q8IY92 SP100-208ENST00000427101 1922 ntTSL 2 BASIC21.69■■□□□ 1.06
SLX4Q8IY92 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
SLX4Q8IY92 BCAR1-209ENST00000546196 1340 ntBASIC21.69■■□□□ 1.06
SLX4Q8IY92 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLX4Q8IY92 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLX4Q8IY92 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLX4Q8IY92 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
SLX4Q8IY92 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLX4Q8IY92 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
SLX4Q8IY92 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC21.68■■□□□ 1.06
SLX4Q8IY92 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLX4Q8IY92 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLX4Q8IY92 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC21.68■■□□□ 1.06
SLX4Q8IY92 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLX4Q8IY92 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC21.68■■□□□ 1.06
SLX4Q8IY92 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLX4Q8IY92 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.68■■□□□ 1.06
SLX4Q8IY92 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLX4Q8IY92 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLX4Q8IY92 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC21.68■■□□□ 1.06
SLX4Q8IY92 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC21.68■■□□□ 1.06
SLX4Q8IY92 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC21.68■■□□□ 1.06
SLX4Q8IY92 AC239800.4-201ENST00000603712 296 ntBASIC21.68■■□□□ 1.06
SLX4Q8IY92 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC21.68■■□□□ 1.06
SLX4Q8IY92 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.68■■□□□ 1.06
SLX4Q8IY92 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLX4Q8IY92 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SLX4Q8IY92 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLX4Q8IY92 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SLX4Q8IY92 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLX4Q8IY92 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SLX4Q8IY92 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC21.67■■□□□ 1.06
SLX4Q8IY92 SMN2-210ENST00000511812 867 ntTSL 2 BASIC21.67■■□□□ 1.06
SLX4Q8IY92 GREM1-201ENST00000560677 623 ntTSL 4 BASIC21.67■■□□□ 1.06
SLX4Q8IY92 AC068137.2-201ENST00000605408 478 ntBASIC21.67■■□□□ 1.06
SLX4Q8IY92 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
SLX4Q8IY92 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SLX4Q8IY92 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLX4Q8IY92 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC21.67■■□□□ 1.06
SLX4Q8IY92 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLX4Q8IY92 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC21.67■■□□□ 1.06
SLX4Q8IY92 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC21.67■■□□□ 1.06
SLX4Q8IY92 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLX4Q8IY92 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLX4Q8IY92 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SLX4Q8IY92 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC21.66■■□□□ 1.06
SLX4Q8IY92 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
SLX4Q8IY92 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SLX4Q8IY92 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC21.66■■□□□ 1.06
SLX4Q8IY92 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC21.66■■□□□ 1.06
SLX4Q8IY92 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC21.66■■□□□ 1.06
SLX4Q8IY92 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC21.66■■□□□ 1.06
SLX4Q8IY92 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
SLX4Q8IY92 AL513210.1-201ENST00000629608 234 ntBASIC21.66■■□□□ 1.06
SLX4Q8IY92 PHGDH-209ENST00000641074 1780 ntBASIC21.66■■□□□ 1.06
SLX4Q8IY92 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLX4Q8IY92 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SLX4Q8IY92 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.66■■□□□ 1.06
SLX4Q8IY92 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLX4Q8IY92 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
SLX4Q8IY92 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLX4Q8IY92 COX5BP2-201ENST00000392354 334 ntBASIC21.66■■□□□ 1.06
SLX4Q8IY92 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLX4Q8IY92 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SLX4Q8IY92 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
SLX4Q8IY92 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC21.66■■□□□ 1.06
SLX4Q8IY92 AC022145.2-201ENST00000598203 171 ntBASIC21.66■■□□□ 1.06
SLX4Q8IY92 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC21.66■■□□□ 1.06
SLX4Q8IY92 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLX4Q8IY92 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SLX4Q8IY92 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLX4Q8IY92 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLX4Q8IY92 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
SLX4Q8IY92 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC21.65■■□□□ 1.06
SLX4Q8IY92 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SLX4Q8IY92 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SLX4Q8IY92 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC21.65■■□□□ 1.06
SLX4Q8IY92 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLX4Q8IY92 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC21.65■■□□□ 1.06
SLX4Q8IY92 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC21.65■■□□□ 1.06
SLX4Q8IY92 AC109462.3-201ENST00000573934 613 ntBASIC21.65■■□□□ 1.06
SLX4Q8IY92 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SLX4Q8IY92 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLX4Q8IY92 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
SLX4Q8IY92 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms