Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.36■□□□□ 0.69
HERC6Q8IVU3 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.36■□□□□ 0.69
HERC6Q8IVU3 AC006557.2-201ENST00000592985 1240 ntBASIC19.36■□□□□ 0.69
HERC6Q8IVU3 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HERC6Q8IVU3 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HERC6Q8IVU3 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
HERC6Q8IVU3 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HERC6Q8IVU3 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HERC6Q8IVU3 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
HERC6Q8IVU3 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HERC6Q8IVU3 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HERC6Q8IVU3 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HERC6Q8IVU3 LINC01126-201ENST00000623515 1646 ntBASIC19.36■□□□□ 0.69
HERC6Q8IVU3 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HERC6Q8IVU3 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.35■□□□□ 0.69
HERC6Q8IVU3 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.35■□□□□ 0.69
HERC6Q8IVU3 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HERC6Q8IVU3 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HERC6Q8IVU3 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HERC6Q8IVU3 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.35■□□□□ 0.69
HERC6Q8IVU3 AP000974.1-201ENST00000623909 2387 ntBASIC19.35■□□□□ 0.69
HERC6Q8IVU3 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
HERC6Q8IVU3 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
HERC6Q8IVU3 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.35■□□□□ 0.69
HERC6Q8IVU3 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HERC6Q8IVU3 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.35■□□□□ 0.69
HERC6Q8IVU3 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HERC6Q8IVU3 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
HERC6Q8IVU3 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.35■□□□□ 0.69
HERC6Q8IVU3 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.35■□□□□ 0.69
HERC6Q8IVU3 KRT18P2-201ENST00000447938 1258 ntBASIC19.35■□□□□ 0.69
HERC6Q8IVU3 YBX1P5-201ENST00000509441 847 ntBASIC19.35■□□□□ 0.69
HERC6Q8IVU3 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HERC6Q8IVU3 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.35■□□□□ 0.69
HERC6Q8IVU3 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
HERC6Q8IVU3 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.35■□□□□ 0.69
HERC6Q8IVU3 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HERC6Q8IVU3 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
HERC6Q8IVU3 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HERC6Q8IVU3 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HERC6Q8IVU3 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HERC6Q8IVU3 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HERC6Q8IVU3 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HERC6Q8IVU3 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
HERC6Q8IVU3 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HERC6Q8IVU3 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HERC6Q8IVU3 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HERC6Q8IVU3 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HERC6Q8IVU3 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HERC6Q8IVU3 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
HERC6Q8IVU3 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.34■□□□□ 0.69
HERC6Q8IVU3 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.34■□□□□ 0.69
HERC6Q8IVU3 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HERC6Q8IVU3 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
HERC6Q8IVU3 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HERC6Q8IVU3 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.34■□□□□ 0.69
HERC6Q8IVU3 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HERC6Q8IVU3 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HERC6Q8IVU3 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.34■□□□□ 0.69
HERC6Q8IVU3 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HERC6Q8IVU3 AC073621.1-201ENST00000392730 636 ntBASIC19.34■□□□□ 0.69
HERC6Q8IVU3 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.34■□□□□ 0.69
HERC6Q8IVU3 CFL1-202ENST00000524553 860 ntTSL 2 BASIC19.34■□□□□ 0.69
HERC6Q8IVU3 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HERC6Q8IVU3 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.34■□□□□ 0.69
HERC6Q8IVU3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
HERC6Q8IVU3 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
HERC6Q8IVU3 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
HERC6Q8IVU3 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.33■□□□□ 0.69
HERC6Q8IVU3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
HERC6Q8IVU3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
HERC6Q8IVU3 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HERC6Q8IVU3 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.33■□□□□ 0.69
HERC6Q8IVU3 AC097374.2-201ENST00000618617 1306 ntBASIC19.33■□□□□ 0.69
HERC6Q8IVU3 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.33■□□□□ 0.69
HERC6Q8IVU3 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HERC6Q8IVU3 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HERC6Q8IVU3 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
HERC6Q8IVU3 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.33■□□□□ 0.68
HERC6Q8IVU3 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
HERC6Q8IVU3 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HERC6Q8IVU3 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HERC6Q8IVU3 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HERC6Q8IVU3 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC19.33■□□□□ 0.68
HERC6Q8IVU3 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.33■□□□□ 0.68
HERC6Q8IVU3 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.33■□□□□ 0.68
HERC6Q8IVU3 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HERC6Q8IVU3 AL161938.1-201ENST00000569833 2180 ntBASIC19.33■□□□□ 0.68
HERC6Q8IVU3 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HERC6Q8IVU3 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HERC6Q8IVU3 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.33■□□□□ 0.68
HERC6Q8IVU3 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HERC6Q8IVU3 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HERC6Q8IVU3 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HERC6Q8IVU3 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HERC6Q8IVU3 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HERC6Q8IVU3 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HERC6Q8IVU3 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HERC6Q8IVU3 AC007967.3-201ENST00000434308 558 ntBASIC19.32■□□□□ 0.68
HERC6Q8IVU3 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms