Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.84■□□□□ 0.29
CCDC71Q8IV32 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
CCDC71Q8IV32 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC71Q8IV32 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CCDC71Q8IV32 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC71Q8IV32 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC71Q8IV32 AC006116.8-202ENST00000587620 1550 ntBASIC16.84■□□□□ 0.29
CCDC71Q8IV32 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CCDC71Q8IV32 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC71Q8IV32 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC71Q8IV32 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC71Q8IV32 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC71Q8IV32 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
CCDC71Q8IV32 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC71Q8IV32 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.84■□□□□ 0.29
CCDC71Q8IV32 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC71Q8IV32 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC71Q8IV32 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC71Q8IV32 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC71Q8IV32 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC71Q8IV32 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC71Q8IV32 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC71Q8IV32 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC71Q8IV32 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC71Q8IV32 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CCDC71Q8IV32 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC71Q8IV32 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCDC71Q8IV32 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.83■□□□□ 0.29
CCDC71Q8IV32 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.83■□□□□ 0.29
CCDC71Q8IV32 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC71Q8IV32 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CCDC71Q8IV32 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC71Q8IV32 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC71Q8IV32 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC71Q8IV32 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC71Q8IV32 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC71Q8IV32 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CCDC71Q8IV32 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC71Q8IV32 DUSP5P1-201ENST00000441325 1139 ntBASIC16.83■□□□□ 0.28
CCDC71Q8IV32 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CCDC71Q8IV32 ZNF444P1-201ENST00000559497 298 ntBASIC16.83■□□□□ 0.28
CCDC71Q8IV32 AL136038.3-201ENST00000561909 1096 ntBASIC16.83■□□□□ 0.28
CCDC71Q8IV32 LINC01311-201ENST00000565162 1445 ntBASIC16.83■□□□□ 0.28
CCDC71Q8IV32 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC71Q8IV32 AC069148.1-201ENST00000608741 768 ntBASIC16.83■□□□□ 0.28
CCDC71Q8IV32 AC083849.1-201ENST00000615227 514 ntBASIC16.83■□□□□ 0.28
CCDC71Q8IV32 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC71Q8IV32 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC71Q8IV32 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.83■□□□□ 0.28
CCDC71Q8IV32 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC71Q8IV32 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC71Q8IV32 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC71Q8IV32 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC71Q8IV32 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
CCDC71Q8IV32 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC71Q8IV32 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC71Q8IV32 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC71Q8IV32 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC71Q8IV32 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CCDC71Q8IV32 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC71Q8IV32 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC71Q8IV32 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC71Q8IV32 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC71Q8IV32 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC71Q8IV32 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC71Q8IV32 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC71Q8IV32 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC71Q8IV32 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC71Q8IV32 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
CCDC71Q8IV32 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC71Q8IV32 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC71Q8IV32 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC71Q8IV32 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC71Q8IV32 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC71Q8IV32 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC71Q8IV32 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC71Q8IV32 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC71Q8IV32 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC71Q8IV32 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
CCDC71Q8IV32 STARP1-201ENST00000397973 869 ntBASIC16.82■□□□□ 0.28
CCDC71Q8IV32 SPDYE15P-201ENST00000424157 909 ntBASIC16.82■□□□□ 0.28
CCDC71Q8IV32 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC71Q8IV32 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC71Q8IV32 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.82■□□□□ 0.28
CCDC71Q8IV32 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC71Q8IV32 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC71Q8IV32 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.82■□□□□ 0.28
CCDC71Q8IV32 HYMAI.1-201ENST00000620949 238 ntBASIC16.82■□□□□ 0.28
CCDC71Q8IV32 CR769767.2-201ENST00000622735 460 ntBASIC16.82■□□□□ 0.28
CCDC71Q8IV32 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CCDC71Q8IV32 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC71Q8IV32 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC71Q8IV32 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC71Q8IV32 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC71Q8IV32 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC71Q8IV32 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC71Q8IV32 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC71Q8IV32 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC71Q8IV32 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC71Q8IV32 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms