Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC15.59■□□□□ 0.09
LRRTM1Q86UE6 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC15.59■□□□□ 0.09
LRRTM1Q86UE6 AC104390.1-201ENST00000555663 520 ntBASIC15.59■□□□□ 0.09
LRRTM1Q86UE6 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.59■□□□□ 0.09
LRRTM1Q86UE6 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
LRRTM1Q86UE6 MIR3180-4-201ENST00000582223 153 ntBASIC15.59■□□□□ 0.09
LRRTM1Q86UE6 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC15.59■□□□□ 0.09
LRRTM1Q86UE6 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
LRRTM1Q86UE6 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC15.59■□□□□ 0.09
LRRTM1Q86UE6 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LRRTM1Q86UE6 CR769767.2-201ENST00000622735 460 ntBASIC15.59■□□□□ 0.09
LRRTM1Q86UE6 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.59■□□□□ 0.09
LRRTM1Q86UE6 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LRRTM1Q86UE6 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.59■□□□□ 0.09
LRRTM1Q86UE6 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
LRRTM1Q86UE6 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LRRTM1Q86UE6 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.59■□□□□ 0.09
LRRTM1Q86UE6 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
LRRTM1Q86UE6 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LRRTM1Q86UE6 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
LRRTM1Q86UE6 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LRRTM1Q86UE6 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRTM1Q86UE6 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRTM1Q86UE6 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.58■□□□□ 0.09
LRRTM1Q86UE6 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
LRRTM1Q86UE6 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
LRRTM1Q86UE6 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LRRTM1Q86UE6 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.58■□□□□ 0.09
LRRTM1Q86UE6 HLA-J-201ENST00000462773 1622 ntBASIC15.58■□□□□ 0.09
LRRTM1Q86UE6 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LRRTM1Q86UE6 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.58■□□□□ 0.08
LRRTM1Q86UE6 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.58■□□□□ 0.08
LRRTM1Q86UE6 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRRTM1Q86UE6 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.58■□□□□ 0.08
LRRTM1Q86UE6 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRRTM1Q86UE6 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRRTM1Q86UE6 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.58■□□□□ 0.08
LRRTM1Q86UE6 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
LRRTM1Q86UE6 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRRTM1Q86UE6 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LRRTM1Q86UE6 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRRTM1Q86UE6 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
LRRTM1Q86UE6 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRRTM1Q86UE6 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRRTM1Q86UE6 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRRTM1Q86UE6 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC15.58■□□□□ 0.08
LRRTM1Q86UE6 NUDT16P1-203ENST00000513809 620 ntBASIC15.58■□□□□ 0.08
LRRTM1Q86UE6 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
LRRTM1Q86UE6 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC15.58■□□□□ 0.08
LRRTM1Q86UE6 WWOX-216ENST00000569818 525 ntBASIC15.58■□□□□ 0.08
LRRTM1Q86UE6 CYGB-204ENST00000589342 815 ntTSL 3 BASIC15.58■□□□□ 0.08
LRRTM1Q86UE6 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC15.58■□□□□ 0.08
LRRTM1Q86UE6 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC15.58■□□□□ 0.08
LRRTM1Q86UE6 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC15.58■□□□□ 0.08
LRRTM1Q86UE6 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRRTM1Q86UE6 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LRRTM1Q86UE6 AC011270.2-201ENST00000624293 2550 ntBASIC15.58■□□□□ 0.08
LRRTM1Q86UE6 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRRTM1Q86UE6 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LRRTM1Q86UE6 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.58■□□□□ 0.08
LRRTM1Q86UE6 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
LRRTM1Q86UE6 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.57■□□□□ 0.08
LRRTM1Q86UE6 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRTM1Q86UE6 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRTM1Q86UE6 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRTM1Q86UE6 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.57■□□□□ 0.08
LRRTM1Q86UE6 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRTM1Q86UE6 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRTM1Q86UE6 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRTM1Q86UE6 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.57■□□□□ 0.08
LRRTM1Q86UE6 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRTM1Q86UE6 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRTM1Q86UE6 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC15.57■□□□□ 0.08
LRRTM1Q86UE6 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC15.57■□□□□ 0.08
LRRTM1Q86UE6 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC15.57■□□□□ 0.08
LRRTM1Q86UE6 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC15.57■□□□□ 0.08
LRRTM1Q86UE6 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC15.57■□□□□ 0.08
LRRTM1Q86UE6 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC15.57■□□□□ 0.08
LRRTM1Q86UE6 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC15.57■□□□□ 0.08
LRRTM1Q86UE6 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC15.57■□□□□ 0.08
LRRTM1Q86UE6 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
LRRTM1Q86UE6 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
LRRTM1Q86UE6 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
LRRTM1Q86UE6 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRTM1Q86UE6 AL118508.1-201ENST00000613502 2345 ntBASIC15.57■□□□□ 0.08
LRRTM1Q86UE6 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRTM1Q86UE6 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.57■□□□□ 0.08
LRRTM1Q86UE6 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRTM1Q86UE6 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.57■□□□□ 0.08
LRRTM1Q86UE6 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRTM1Q86UE6 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRTM1Q86UE6 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LRRTM1Q86UE6 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRTM1Q86UE6 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRTM1Q86UE6 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRTM1Q86UE6 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.56■□□□□ 0.08
LRRTM1Q86UE6 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRTM1Q86UE6 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRRTM1Q86UE6 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRTM1Q86UE6 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms