Protein–RNA interactions for Protein: Q6Q0C0

TRAF7, E3 ubiquitin-protein ligase TRAF7, humanhuman

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF7Q6Q0C0 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAF7Q6Q0C0 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRAF7Q6Q0C0 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAF7Q6Q0C0 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
TRAF7Q6Q0C0 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
TRAF7Q6Q0C0 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAF7Q6Q0C0 AC126763.1-201ENST00000552015 2118 ntBASIC19.45■□□□□ 0.7
TRAF7Q6Q0C0 PHGDH-209ENST00000641074 1780 ntBASIC19.45■□□□□ 0.7
TRAF7Q6Q0C0 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRAF7Q6Q0C0 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
TRAF7Q6Q0C0 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.45■□□□□ 0.7
TRAF7Q6Q0C0 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAF7Q6Q0C0 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAF7Q6Q0C0 COX5BP2-201ENST00000392354 334 ntBASIC19.45■□□□□ 0.7
TRAF7Q6Q0C0 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.45■□□□□ 0.7
TRAF7Q6Q0C0 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRAF7Q6Q0C0 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRAF7Q6Q0C0 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.45■□□□□ 0.7
TRAF7Q6Q0C0 AC002347.1-201ENST00000569543 541 ntBASIC19.45■□□□□ 0.7
TRAF7Q6Q0C0 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.45■□□□□ 0.7
TRAF7Q6Q0C0 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.45■□□□□ 0.7
TRAF7Q6Q0C0 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.45■□□□□ 0.7
TRAF7Q6Q0C0 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAF7Q6Q0C0 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAF7Q6Q0C0 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRAF7Q6Q0C0 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAF7Q6Q0C0 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAF7Q6Q0C0 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRAF7Q6Q0C0 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAF7Q6Q0C0 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.45■□□□□ 0.7
TRAF7Q6Q0C0 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAF7Q6Q0C0 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.44■□□□□ 0.7
TRAF7Q6Q0C0 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TRAF7Q6Q0C0 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAF7Q6Q0C0 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAF7Q6Q0C0 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRAF7Q6Q0C0 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TRAF7Q6Q0C0 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.44■□□□□ 0.7
TRAF7Q6Q0C0 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.44■□□□□ 0.7
TRAF7Q6Q0C0 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TRAF7Q6Q0C0 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAF7Q6Q0C0 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRAF7Q6Q0C0 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.44■□□□□ 0.7
TRAF7Q6Q0C0 RPS8P6-201ENST00000426177 609 ntBASIC19.44■□□□□ 0.7
TRAF7Q6Q0C0 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.44■□□□□ 0.7
TRAF7Q6Q0C0 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.44■□□□□ 0.7
TRAF7Q6Q0C0 AC108751.1-201ENST00000490852 363 ntBASIC19.44■□□□□ 0.7
TRAF7Q6Q0C0 AC136632.2-201ENST00000512891 861 ntBASIC19.44■□□□□ 0.7
TRAF7Q6Q0C0 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRAF7Q6Q0C0 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC19.44■□□□□ 0.7
TRAF7Q6Q0C0 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.44■□□□□ 0.7
TRAF7Q6Q0C0 MIR3687-2-201ENST00000577708 61 ntBASIC19.44■□□□□ 0.7
TRAF7Q6Q0C0 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRAF7Q6Q0C0 MIR3687-1-201ENST00000614492 61 ntBASIC19.44■□□□□ 0.7
TRAF7Q6Q0C0 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.44■□□□□ 0.7
TRAF7Q6Q0C0 AC073592.5-201ENST00000624854 528 ntBASIC19.44■□□□□ 0.7
TRAF7Q6Q0C0 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRAF7Q6Q0C0 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.44■□□□□ 0.7
TRAF7Q6Q0C0 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAF7Q6Q0C0 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TRAF7Q6Q0C0 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.44■□□□□ 0.7
TRAF7Q6Q0C0 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.44■□□□□ 0.7
TRAF7Q6Q0C0 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.43■□□□□ 0.7
TRAF7Q6Q0C0 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAF7Q6Q0C0 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAF7Q6Q0C0 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TRAF7Q6Q0C0 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAF7Q6Q0C0 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAF7Q6Q0C0 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAF7Q6Q0C0 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAF7Q6Q0C0 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAF7Q6Q0C0 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAF7Q6Q0C0 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAF7Q6Q0C0 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.43■□□□□ 0.7
TRAF7Q6Q0C0 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.43■□□□□ 0.7
TRAF7Q6Q0C0 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC19.43■□□□□ 0.7
TRAF7Q6Q0C0 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAF7Q6Q0C0 DUTP2-201ENST00000519164 463 ntBASIC19.43■□□□□ 0.7
TRAF7Q6Q0C0 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.43■□□□□ 0.7
TRAF7Q6Q0C0 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.43■□□□□ 0.7
TRAF7Q6Q0C0 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.43■□□□□ 0.7
TRAF7Q6Q0C0 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.43■□□□□ 0.7
TRAF7Q6Q0C0 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
TRAF7Q6Q0C0 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.43■□□□□ 0.7
TRAF7Q6Q0C0 AC005593.1-201ENST00000624894 515 ntBASIC19.43■□□□□ 0.7
TRAF7Q6Q0C0 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAF7Q6Q0C0 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAF7Q6Q0C0 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.43■□□□□ 0.7
TRAF7Q6Q0C0 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAF7Q6Q0C0 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAF7Q6Q0C0 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAF7Q6Q0C0 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.43■□□□□ 0.7
TRAF7Q6Q0C0 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAF7Q6Q0C0 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAF7Q6Q0C0 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.42■□□□□ 0.7
TRAF7Q6Q0C0 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
TRAF7Q6Q0C0 AL353593.2-201ENST00000602529 1483 ntBASIC19.42■□□□□ 0.7
TRAF7Q6Q0C0 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
TRAF7Q6Q0C0 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.42■□□□□ 0.7
TRAF7Q6Q0C0 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms