Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.59□□□□□ -0.23
MRPL54Q6P161 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
MRPL54Q6P161 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
MRPL54Q6P161 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
MRPL54Q6P161 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
MRPL54Q6P161 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
MRPL54Q6P161 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
MRPL54Q6P161 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
MRPL54Q6P161 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
MRPL54Q6P161 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
MRPL54Q6P161 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
MRPL54Q6P161 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
MRPL54Q6P161 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
MRPL54Q6P161 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
MRPL54Q6P161 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC13.58□□□□□ -0.23
MRPL54Q6P161 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
MRPL54Q6P161 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
MRPL54Q6P161 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
MRPL54Q6P161 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
MRPL54Q6P161 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC13.58□□□□□ -0.24
MRPL54Q6P161 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.24
MRPL54Q6P161 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC13.58□□□□□ -0.24
MRPL54Q6P161 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
MRPL54Q6P161 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC13.58□□□□□ -0.24
MRPL54Q6P161 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
MRPL54Q6P161 PGR-209ENST00000617858 2816 ntTSL 5 BASIC13.58□□□□□ -0.24
MRPL54Q6P161 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
MRPL54Q6P161 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
MRPL54Q6P161 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
MRPL54Q6P161 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
MRPL54Q6P161 JTB-203ENST00000368589 1216 ntTSL 2 BASIC13.58□□□□□ -0.24
MRPL54Q6P161 PEMT-206ENST00000435340 960 ntTSL 5 BASIC13.58□□□□□ -0.24
MRPL54Q6P161 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC13.58□□□□□ -0.24
MRPL54Q6P161 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC13.58□□□□□ -0.24
MRPL54Q6P161 PNN-205ENST00000556530 601 ntTSL 2 BASIC13.58□□□□□ -0.24
MRPL54Q6P161 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC13.58□□□□□ -0.24
MRPL54Q6P161 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC13.58□□□□□ -0.24
MRPL54Q6P161 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC13.58□□□□□ -0.24
MRPL54Q6P161 RAP2CP1-201ENST00000605103 478 ntBASIC13.58□□□□□ -0.24
MRPL54Q6P161 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
MRPL54Q6P161 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC13.58□□□□□ -0.24
MRPL54Q6P161 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
MRPL54Q6P161 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
MRPL54Q6P161 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
MRPL54Q6P161 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.58□□□□□ -0.24
MRPL54Q6P161 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
MRPL54Q6P161 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
MRPL54Q6P161 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
MRPL54Q6P161 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
MRPL54Q6P161 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
MRPL54Q6P161 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
MRPL54Q6P161 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
MRPL54Q6P161 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
MRPL54Q6P161 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC13.57□□□□□ -0.24
MRPL54Q6P161 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MRPL54Q6P161 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
MRPL54Q6P161 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC13.57□□□□□ -0.24
MRPL54Q6P161 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
MRPL54Q6P161 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
MRPL54Q6P161 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
MRPL54Q6P161 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
MRPL54Q6P161 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC13.57□□□□□ -0.24
MRPL54Q6P161 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
MRPL54Q6P161 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MRPL54Q6P161 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC13.57□□□□□ -0.24
MRPL54Q6P161 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
MRPL54Q6P161 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MRPL54Q6P161 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
MRPL54Q6P161 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
MRPL54Q6P161 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
MRPL54Q6P161 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC13.57□□□□□ -0.24
MRPL54Q6P161 GGT1-206ENST00000404223 952 ntTSL 2 BASIC13.57□□□□□ -0.24
MRPL54Q6P161 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC13.57□□□□□ -0.24
MRPL54Q6P161 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
MRPL54Q6P161 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
MRPL54Q6P161 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
MRPL54Q6P161 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC13.57□□□□□ -0.24
MRPL54Q6P161 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC13.57□□□□□ -0.24
MRPL54Q6P161 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC13.57□□□□□ -0.24
MRPL54Q6P161 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC13.57□□□□□ -0.24
MRPL54Q6P161 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MRPL54Q6P161 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MRPL54Q6P161 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC13.57□□□□□ -0.24
MRPL54Q6P161 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
MRPL54Q6P161 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
MRPL54Q6P161 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
MRPL54Q6P161 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MRPL54Q6P161 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
MRPL54Q6P161 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
MRPL54Q6P161 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
MRPL54Q6P161 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC13.57□□□□□ -0.24
MRPL54Q6P161 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC13.57□□□□□ -0.24
MRPL54Q6P161 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MRPL54Q6P161 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC13.56□□□□□ -0.24
MRPL54Q6P161 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
MRPL54Q6P161 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
MRPL54Q6P161 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
MRPL54Q6P161 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
MRPL54Q6P161 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MRPL54Q6P161 AL365209.1-201ENST00000624418 6473 ntBASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms