Protein–RNA interactions for Protein: Q5VT98

PRAMEF20, PRAME family member 20, humanhuman

Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF20Q5VT98 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.42■□□□□ 0.22
PRAMEF20Q5VT98 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PRAMEF20Q5VT98 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.42■□□□□ 0.22
PRAMEF20Q5VT98 IFNL4P1-201ENST00000607083 540 ntBASIC16.42■□□□□ 0.22
PRAMEF20Q5VT98 AL353801.3-201ENST00000609898 542 ntBASIC16.42■□□□□ 0.22
PRAMEF20Q5VT98 AL121772.3-201ENST00000610840 674 ntBASIC16.42■□□□□ 0.22
PRAMEF20Q5VT98 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRAMEF20Q5VT98 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.42■□□□□ 0.22
PRAMEF20Q5VT98 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PRAMEF20Q5VT98 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRAMEF20Q5VT98 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PRAMEF20Q5VT98 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.42■□□□□ 0.22
PRAMEF20Q5VT98 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.42■□□□□ 0.22
PRAMEF20Q5VT98 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PRAMEF20Q5VT98 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRAMEF20Q5VT98 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.41■□□□□ 0.22
PRAMEF20Q5VT98 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF20Q5VT98 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF20Q5VT98 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PRAMEF20Q5VT98 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF20Q5VT98 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF20Q5VT98 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF20Q5VT98 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.41■□□□□ 0.22
PRAMEF20Q5VT98 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.41■□□□□ 0.22
PRAMEF20Q5VT98 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF20Q5VT98 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
PRAMEF20Q5VT98 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF20Q5VT98 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF20Q5VT98 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.41■□□□□ 0.22
PRAMEF20Q5VT98 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF20Q5VT98 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.41■□□□□ 0.22
PRAMEF20Q5VT98 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.41■□□□□ 0.22
PRAMEF20Q5VT98 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.41■□□□□ 0.22
PRAMEF20Q5VT98 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.41■□□□□ 0.22
PRAMEF20Q5VT98 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.41■□□□□ 0.22
PRAMEF20Q5VT98 AC091304.2-201ENST00000564639 760 ntBASIC16.41■□□□□ 0.22
PRAMEF20Q5VT98 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF20Q5VT98 AL691432.3-201ENST00000621860 400 ntBASIC16.41■□□□□ 0.22
PRAMEF20Q5VT98 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.41■□□□□ 0.22
PRAMEF20Q5VT98 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.41■□□□□ 0.22
PRAMEF20Q5VT98 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.41■□□□□ 0.22
PRAMEF20Q5VT98 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.41■□□□□ 0.22
PRAMEF20Q5VT98 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF20Q5VT98 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.41■□□□□ 0.22
PRAMEF20Q5VT98 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.41■□□□□ 0.22
PRAMEF20Q5VT98 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF20Q5VT98 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
PRAMEF20Q5VT98 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PRAMEF20Q5VT98 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.4■□□□□ 0.22
PRAMEF20Q5VT98 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF20Q5VT98 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF20Q5VT98 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PRAMEF20Q5VT98 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
PRAMEF20Q5VT98 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF20Q5VT98 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.4■□□□□ 0.22
PRAMEF20Q5VT98 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.4■□□□□ 0.22
PRAMEF20Q5VT98 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF20Q5VT98 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF20Q5VT98 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF20Q5VT98 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.4■□□□□ 0.22
PRAMEF20Q5VT98 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF20Q5VT98 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PRAMEF20Q5VT98 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
PRAMEF20Q5VT98 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.4■□□□□ 0.22
PRAMEF20Q5VT98 TSPY19P-201ENST00000418461 509 ntBASIC16.4■□□□□ 0.22
PRAMEF20Q5VT98 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.4■□□□□ 0.22
PRAMEF20Q5VT98 TSPY18P-201ENST00000441642 509 ntBASIC16.4■□□□□ 0.22
PRAMEF20Q5VT98 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.4■□□□□ 0.22
PRAMEF20Q5VT98 KRT18P31-201ENST00000506277 1292 ntBASIC16.4■□□□□ 0.22
PRAMEF20Q5VT98 UNC93B7-201ENST00000509439 705 ntBASIC16.4■□□□□ 0.22
PRAMEF20Q5VT98 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.4■□□□□ 0.22
PRAMEF20Q5VT98 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.4■□□□□ 0.22
PRAMEF20Q5VT98 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.4■□□□□ 0.22
PRAMEF20Q5VT98 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF20Q5VT98 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF20Q5VT98 AC111152.3-201ENST00000569699 673 ntBASIC16.4■□□□□ 0.22
PRAMEF20Q5VT98 BNIP3P18-201ENST00000593976 575 ntBASIC16.4■□□□□ 0.22
PRAMEF20Q5VT98 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.4■□□□□ 0.22
PRAMEF20Q5VT98 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PRAMEF20Q5VT98 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PRAMEF20Q5VT98 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.4■□□□□ 0.22
PRAMEF20Q5VT98 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
PRAMEF20Q5VT98 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF20Q5VT98 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF20Q5VT98 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.4■□□□□ 0.22
PRAMEF20Q5VT98 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
PRAMEF20Q5VT98 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF20Q5VT98 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF20Q5VT98 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF20Q5VT98 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.4■□□□□ 0.22
PRAMEF20Q5VT98 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF20Q5VT98 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
PRAMEF20Q5VT98 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
PRAMEF20Q5VT98 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.39■□□□□ 0.22
PRAMEF20Q5VT98 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRAMEF20Q5VT98 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
PRAMEF20Q5VT98 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRAMEF20Q5VT98 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRAMEF20Q5VT98 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRAMEF20Q5VT98 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms