Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
CDC42BPAQ5VT25 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CDC42BPAQ5VT25 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC26.93■■□□□ 1.9
CDC42BPAQ5VT25 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CDC42BPAQ5VT25 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC26.93■■□□□ 1.9
CDC42BPAQ5VT25 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CDC42BPAQ5VT25 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CDC42BPAQ5VT25 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
CDC42BPAQ5VT25 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
CDC42BPAQ5VT25 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
CDC42BPAQ5VT25 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
CDC42BPAQ5VT25 PNMT-202ENST00000394246 821 ntTSL 2 BASIC26.93■■□□□ 1.9
CDC42BPAQ5VT25 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC26.93■■□□□ 1.9
CDC42BPAQ5VT25 AP000344.2-201ENST00000512987 629 ntBASIC26.93■■□□□ 1.9
CDC42BPAQ5VT25 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC26.93■■□□□ 1.9
CDC42BPAQ5VT25 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
CDC42BPAQ5VT25 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC26.92■■□□□ 1.9
CDC42BPAQ5VT25 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
CDC42BPAQ5VT25 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CDC42BPAQ5VT25 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC26.92■■□□□ 1.9
CDC42BPAQ5VT25 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC26.92■■□□□ 1.9
CDC42BPAQ5VT25 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC26.92■■□□□ 1.9
CDC42BPAQ5VT25 PC-208ENST00000529047 1607 ntTSL 3 BASIC26.92■■□□□ 1.9
CDC42BPAQ5VT25 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CDC42BPAQ5VT25 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC26.92■■□□□ 1.9
CDC42BPAQ5VT25 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC26.92■■□□□ 1.9
CDC42BPAQ5VT25 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC26.92■■□□□ 1.9
CDC42BPAQ5VT25 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC26.92■■□□□ 1.9
CDC42BPAQ5VT25 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
CDC42BPAQ5VT25 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CDC42BPAQ5VT25 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC26.92■■□□□ 1.9
CDC42BPAQ5VT25 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CDC42BPAQ5VT25 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CDC42BPAQ5VT25 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC26.91■■□□□ 1.9
CDC42BPAQ5VT25 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC26.91■■□□□ 1.9
CDC42BPAQ5VT25 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CDC42BPAQ5VT25 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC26.91■■□□□ 1.9
CDC42BPAQ5VT25 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC26.91■■□□□ 1.9
CDC42BPAQ5VT25 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CDC42BPAQ5VT25 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CDC42BPAQ5VT25 CNN2P11-201ENST00000429351 262 ntBASIC26.91■■□□□ 1.9
CDC42BPAQ5VT25 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC26.91■■□□□ 1.9
CDC42BPAQ5VT25 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC26.91■■□□□ 1.9
CDC42BPAQ5VT25 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC26.91■■□□□ 1.9
CDC42BPAQ5VT25 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC26.91■■□□□ 1.9
CDC42BPAQ5VT25 RPS15-207ENST00000591032 550 ntTSL 3 BASIC26.91■■□□□ 1.9
CDC42BPAQ5VT25 AC004790.2-201ENST00000623588 572 ntBASIC26.91■■□□□ 1.9
CDC42BPAQ5VT25 AC079781.4-201ENST00000641908 219 ntBASIC26.91■■□□□ 1.9
CDC42BPAQ5VT25 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
CDC42BPAQ5VT25 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC26.91■■□□□ 1.9
CDC42BPAQ5VT25 PC-214ENST00000628663 1470 ntTSL 5 BASIC26.91■■□□□ 1.9
CDC42BPAQ5VT25 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CDC42BPAQ5VT25 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CDC42BPAQ5VT25 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC26.91■■□□□ 1.9
CDC42BPAQ5VT25 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CDC42BPAQ5VT25 GOLGA6L17P-202ENST00000614358 1398 ntBASIC26.91■■□□□ 1.9
CDC42BPAQ5VT25 HARS-201ENST00000307633 1780 ntTSL 2 BASIC26.91■■□□□ 1.9
CDC42BPAQ5VT25 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
CDC42BPAQ5VT25 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC26.91■■□□□ 1.9
CDC42BPAQ5VT25 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CDC42BPAQ5VT25 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC26.91■■□□□ 1.9
CDC42BPAQ5VT25 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CDC42BPAQ5VT25 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CDC42BPAQ5VT25 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CDC42BPAQ5VT25 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC26.9■■□□□ 1.9
CDC42BPAQ5VT25 KRT19P2-202ENST00000557173 1012 ntBASIC26.9■■□□□ 1.9
CDC42BPAQ5VT25 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC26.9■■□□□ 1.9
CDC42BPAQ5VT25 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC26.9■■□□□ 1.9
CDC42BPAQ5VT25 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC26.9■■□□□ 1.9
CDC42BPAQ5VT25 STK25P1-201ENST00000585406 838 ntBASIC26.9■■□□□ 1.9
CDC42BPAQ5VT25 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC26.9■■□□□ 1.9
CDC42BPAQ5VT25 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CDC42BPAQ5VT25 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
CDC42BPAQ5VT25 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CDC42BPAQ5VT25 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CDC42BPAQ5VT25 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CDC42BPAQ5VT25 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC26.9■■□□□ 1.9
CDC42BPAQ5VT25 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
CDC42BPAQ5VT25 AC009949.1-201ENST00000623048 1830 ntBASIC26.9■■□□□ 1.9
CDC42BPAQ5VT25 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
CDC42BPAQ5VT25 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CDC42BPAQ5VT25 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC26.9■■□□□ 1.9
CDC42BPAQ5VT25 STK19B-204ENST00000512515 211 ntBASIC26.9■■□□□ 1.9
CDC42BPAQ5VT25 CD63-210ENST00000550776 870 ntTSL 5 BASIC26.9■■□□□ 1.9
CDC42BPAQ5VT25 TMED1-207ENST00000591695 809 ntTSL 5 BASIC26.9■■□□□ 1.9
CDC42BPAQ5VT25 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC26.9■■□□□ 1.9
CDC42BPAQ5VT25 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC26.9■■□□□ 1.9
CDC42BPAQ5VT25 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
CDC42BPAQ5VT25 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
CDC42BPAQ5VT25 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC26.89■■□□□ 1.9
CDC42BPAQ5VT25 BX276092.7-203ENST00000637198 1536 ntBASIC26.89■■□□□ 1.9
CDC42BPAQ5VT25 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
CDC42BPAQ5VT25 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
CDC42BPAQ5VT25 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
CDC42BPAQ5VT25 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
CDC42BPAQ5VT25 RHOQP3-201ENST00000437982 621 ntBASIC26.89■■□□□ 1.9
CDC42BPAQ5VT25 POR-209ENST00000439269 1858 ntTSL 2 BASIC26.89■■□□□ 1.9
CDC42BPAQ5VT25 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.9
CDC42BPAQ5VT25 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC26.89■■□□□ 1.9
CDC42BPAQ5VT25 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms