Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ATPAF1Q5TC12 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
ATPAF1Q5TC12 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC15.6■□□□□ 0.09
ATPAF1Q5TC12 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ATPAF1Q5TC12 PP12613-201ENST00000424958 2230 ntBASIC15.6■□□□□ 0.09
ATPAF1Q5TC12 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ATPAF1Q5TC12 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
ATPAF1Q5TC12 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ATPAF1Q5TC12 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
ATPAF1Q5TC12 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.6■□□□□ 0.09
ATPAF1Q5TC12 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.6■□□□□ 0.09
ATPAF1Q5TC12 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ATPAF1Q5TC12 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ATPAF1Q5TC12 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ATPAF1Q5TC12 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.6■□□□□ 0.09
ATPAF1Q5TC12 AC112777.1-201ENST00000540175 1423 ntBASIC15.6■□□□□ 0.09
ATPAF1Q5TC12 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
ATPAF1Q5TC12 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
ATPAF1Q5TC12 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.59■□□□□ 0.09
ATPAF1Q5TC12 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ATPAF1Q5TC12 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
ATPAF1Q5TC12 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
ATPAF1Q5TC12 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ATPAF1Q5TC12 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
ATPAF1Q5TC12 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
ATPAF1Q5TC12 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ATPAF1Q5TC12 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ATPAF1Q5TC12 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ATPAF1Q5TC12 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.59■□□□□ 0.09
ATPAF1Q5TC12 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ATPAF1Q5TC12 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ATPAF1Q5TC12 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC15.59■□□□□ 0.09
ATPAF1Q5TC12 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ATPAF1Q5TC12 ILF2-202ENST00000368681 726 ntTSL 2 BASIC15.59■□□□□ 0.09
ATPAF1Q5TC12 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC15.59■□□□□ 0.09
ATPAF1Q5TC12 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC15.59■□□□□ 0.09
ATPAF1Q5TC12 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ATPAF1Q5TC12 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC15.59■□□□□ 0.09
ATPAF1Q5TC12 ARL16-209ENST00000573715 763 ntTSL 3 BASIC15.59■□□□□ 0.09
ATPAF1Q5TC12 ARL16-211ENST00000576135 694 ntTSL 3 BASIC15.59■□□□□ 0.09
ATPAF1Q5TC12 NEK4P2-201ENST00000580004 1012 ntBASIC15.59■□□□□ 0.09
ATPAF1Q5TC12 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC15.59■□□□□ 0.09
ATPAF1Q5TC12 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ATPAF1Q5TC12 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.59■□□□□ 0.09
ATPAF1Q5TC12 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ATPAF1Q5TC12 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
ATPAF1Q5TC12 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
ATPAF1Q5TC12 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ATPAF1Q5TC12 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
ATPAF1Q5TC12 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.59■□□□□ 0.09
ATPAF1Q5TC12 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ATPAF1Q5TC12 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.59■□□□□ 0.09
ATPAF1Q5TC12 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
ATPAF1Q5TC12 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ATPAF1Q5TC12 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
ATPAF1Q5TC12 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.59■□□□□ 0.09
ATPAF1Q5TC12 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.59■□□□□ 0.09
ATPAF1Q5TC12 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ATPAF1Q5TC12 KRT8P45-201ENST00000414328 1447 ntBASIC15.59■□□□□ 0.09
ATPAF1Q5TC12 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ATPAF1Q5TC12 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
ATPAF1Q5TC12 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ATPAF1Q5TC12 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
ATPAF1Q5TC12 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
ATPAF1Q5TC12 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.09
ATPAF1Q5TC12 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
ATPAF1Q5TC12 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.09
ATPAF1Q5TC12 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
ATPAF1Q5TC12 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.09
ATPAF1Q5TC12 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
ATPAF1Q5TC12 AC034236.2-201ENST00000606662 1610 ntBASIC15.58■□□□□ 0.09
ATPAF1Q5TC12 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
ATPAF1Q5TC12 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
ATPAF1Q5TC12 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
ATPAF1Q5TC12 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ATPAF1Q5TC12 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ATPAF1Q5TC12 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
ATPAF1Q5TC12 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
ATPAF1Q5TC12 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ATPAF1Q5TC12 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ATPAF1Q5TC12 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.58■□□□□ 0.08
ATPAF1Q5TC12 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC15.58■□□□□ 0.08
ATPAF1Q5TC12 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ATPAF1Q5TC12 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ATPAF1Q5TC12 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
ATPAF1Q5TC12 AC113347.1-201ENST00000413321 391 ntBASIC15.58■□□□□ 0.08
ATPAF1Q5TC12 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC15.58■□□□□ 0.08
ATPAF1Q5TC12 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC15.58■□□□□ 0.08
ATPAF1Q5TC12 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC15.58■□□□□ 0.08
ATPAF1Q5TC12 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.58■□□□□ 0.08
ATPAF1Q5TC12 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
ATPAF1Q5TC12 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
ATPAF1Q5TC12 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.58■□□□□ 0.08
ATPAF1Q5TC12 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC15.58■□□□□ 0.08
ATPAF1Q5TC12 AL138966.2-201ENST00000621997 464 ntBASIC15.58■□□□□ 0.08
ATPAF1Q5TC12 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
ATPAF1Q5TC12 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
ATPAF1Q5TC12 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
ATPAF1Q5TC12 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ATPAF1Q5TC12 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms