Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL13A1Q5TAT6 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
COL13A1Q5TAT6 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COL13A1Q5TAT6 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
COL13A1Q5TAT6 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.97■□□□□ 0.79
COL13A1Q5TAT6 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL13A1Q5TAT6 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
COL13A1Q5TAT6 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.97■□□□□ 0.79
COL13A1Q5TAT6 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL13A1Q5TAT6 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COL13A1Q5TAT6 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
COL13A1Q5TAT6 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL13A1Q5TAT6 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
COL13A1Q5TAT6 AL135744.1-201ENST00000565098 629 ntBASIC19.97■□□□□ 0.79
COL13A1Q5TAT6 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
COL13A1Q5TAT6 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC19.97■□□□□ 0.79
COL13A1Q5TAT6 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
COL13A1Q5TAT6 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
COL13A1Q5TAT6 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL13A1Q5TAT6 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL13A1Q5TAT6 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
COL13A1Q5TAT6 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL13A1Q5TAT6 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL13A1Q5TAT6 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.96■□□□□ 0.79
COL13A1Q5TAT6 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.96■□□□□ 0.79
COL13A1Q5TAT6 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL13A1Q5TAT6 AC148477.5-201ENST00000625164 1645 ntBASIC19.96■□□□□ 0.79
COL13A1Q5TAT6 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL13A1Q5TAT6 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL13A1Q5TAT6 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC19.96■□□□□ 0.79
COL13A1Q5TAT6 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC19.96■□□□□ 0.79
COL13A1Q5TAT6 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC19.96■□□□□ 0.79
COL13A1Q5TAT6 AC253536.4-201ENST00000440539 267 ntBASIC19.96■□□□□ 0.79
COL13A1Q5TAT6 AL513480.1-201ENST00000451731 511 ntBASIC19.96■□□□□ 0.79
COL13A1Q5TAT6 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC19.96■□□□□ 0.79
COL13A1Q5TAT6 MFF-223ENST00000524634 647 ntTSL 2 BASIC19.96■□□□□ 0.79
COL13A1Q5TAT6 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC19.96■□□□□ 0.79
COL13A1Q5TAT6 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL13A1Q5TAT6 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC19.96■□□□□ 0.79
COL13A1Q5TAT6 AC073592.8-201ENST00000624126 511 ntBASIC19.96■□□□□ 0.79
COL13A1Q5TAT6 AL353593.2-201ENST00000602529 1483 ntBASIC19.96■□□□□ 0.79
COL13A1Q5TAT6 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL13A1Q5TAT6 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
COL13A1Q5TAT6 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL13A1Q5TAT6 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL13A1Q5TAT6 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.95■□□□□ 0.78
COL13A1Q5TAT6 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL13A1Q5TAT6 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL13A1Q5TAT6 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC19.95■□□□□ 0.78
COL13A1Q5TAT6 BTBD6P1-201ENST00000412176 1267 ntBASIC19.95■□□□□ 0.78
COL13A1Q5TAT6 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
COL13A1Q5TAT6 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC19.95■□□□□ 0.78
COL13A1Q5TAT6 AC079328.1-201ENST00000560358 952 ntBASIC19.95■□□□□ 0.78
COL13A1Q5TAT6 AC106872.11-201ENST00000605838 421 ntBASIC19.95■□□□□ 0.78
COL13A1Q5TAT6 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.95■□□□□ 0.78
COL13A1Q5TAT6 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL13A1Q5TAT6 UXT-AS1-201ENST00000590504 1525 ntBASIC19.95■□□□□ 0.78
COL13A1Q5TAT6 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.95■□□□□ 0.78
COL13A1Q5TAT6 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL13A1Q5TAT6 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.95■□□□□ 0.78
COL13A1Q5TAT6 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL13A1Q5TAT6 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL13A1Q5TAT6 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
COL13A1Q5TAT6 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.94■□□□□ 0.78
COL13A1Q5TAT6 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.94■□□□□ 0.78
COL13A1Q5TAT6 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
COL13A1Q5TAT6 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
COL13A1Q5TAT6 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
COL13A1Q5TAT6 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL13A1Q5TAT6 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
COL13A1Q5TAT6 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL13A1Q5TAT6 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL13A1Q5TAT6 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
COL13A1Q5TAT6 NSL1-201ENST00000366976 722 ntTSL 2 BASIC19.94■□□□□ 0.78
COL13A1Q5TAT6 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
COL13A1Q5TAT6 AC096633.1-201ENST00000422446 749 ntBASIC19.94■□□□□ 0.78
COL13A1Q5TAT6 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC19.94■□□□□ 0.78
COL13A1Q5TAT6 FADS2-212ENST00000522639 360 ntTSL 5 BASIC19.94■□□□□ 0.78
COL13A1Q5TAT6 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19.94■□□□□ 0.78
COL13A1Q5TAT6 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC19.94■□□□□ 0.78
COL13A1Q5TAT6 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC19.94■□□□□ 0.78
COL13A1Q5TAT6 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC19.94■□□□□ 0.78
COL13A1Q5TAT6 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC19.94■□□□□ 0.78
COL13A1Q5TAT6 FADS2-215ENST00000574708 385 ntTSL 3 BASIC19.94■□□□□ 0.78
COL13A1Q5TAT6 MIR3615-201ENST00000581999 87 ntBASIC19.94■□□□□ 0.78
COL13A1Q5TAT6 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.94■□□□□ 0.78
COL13A1Q5TAT6 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC19.94■□□□□ 0.78
COL13A1Q5TAT6 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL13A1Q5TAT6 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL13A1Q5TAT6 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL13A1Q5TAT6 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL13A1Q5TAT6 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL13A1Q5TAT6 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL13A1Q5TAT6 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL13A1Q5TAT6 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC19.93■□□□□ 0.78
COL13A1Q5TAT6 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.93■□□□□ 0.78
COL13A1Q5TAT6 CLDN5-201ENST00000403084 2357 ntBASIC19.93■□□□□ 0.78
COL13A1Q5TAT6 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL13A1Q5TAT6 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
COL13A1Q5TAT6 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms